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THE GENETIC SEQUENCE BINARY FACTOR GROUPING ROUTINES
The Genetic sequence binary factor grouping is a set of routines that computes V3 CEL scan data producing catalogue(s) of genetic sequence data , for the purpose of genetic analysis , in the manner of displayed above , a large catalogue of genetic sequence families of curves . (partial display groups of curves extracted from prostate cancer datasets - prostate normal )
Group of charts derived from Lung_normal (normal cell scans) dataset from Lung cancer datasets .
Group of charts derived from Lung_normal using Y-axis index mult by 8 (previous chart value - 4) .
Group of charts derived from Lung_ADENO_1 (lung cancer cell scans) dataset from Lung cancer datasets .
(Above) comparisson of lung carcinoid and lung normal from Lung cancer datasets .
Results from CL2001032629AA.CEL (Lung cancer datasets) , (upper picture charts carcinoids-normal row-pair 3)
Column 5 chart line index values grouping :
00518.00000 00006.00000 !(0)
00519.00000 00001.00000
00522.00000 00003.00000 !(1)
00547.00000 00025.00000 !(1)
00582.00000 00035.00000 !(1)
00583.00000 00001.00000
00586.00000 00003.00000 !(2)
00592.00000 00006.00000 !(2)
00595.00000 00003.00000 !(2)
00614.00000 00019.00000 !(2)
00615.00000 00001.00000
00618.00000 00003.00000 !(3)
00624.00000 00006.00000 !(3)
00627.00000 00003.00000 !(3)
00662.00000 00035.00000 !(3)
00663.00000 00001.00000
00666.00000 00003.00000 !(4)
00712.00000 00046.00000 !(4)
00771.00000 00059.00000 !(4)
00772.00000 00001.00000
00780.00000 00008.00000 !(5)
00790.00000 00010.00000 !(5)
00796.00000 00006.00000 !(5)
00820.00000 00024.00000 !(5)
00830.00000 00010.00000 !(5)
00831.00000 00001.00000
00851.00000 00020.00000 !(6)
00857.00000 00006.00000 !(6)
00862.00000 00005.00000 !(6)
00883.00000 00021.00000 !(6)
00889.00000 00006.00000 !(6)
00948.00000 00059.00000 !(6)
00954.00000 00006.00000 !(6)
00963.00000 00009.00000 !(6)
00964.00000 00001.00000
00970.00000 00006.00000 !(7)
00974.00000 00004.00000 !(7)
00986.00000 00012.00000 !(7)
00990.00000 00004.00000 !(7)
(0)!00512 00108.50000 00000.25000
00108.50000 00000.25000 !
AB002390 Cluster Incl. AB002390:Human mRNA for KIAA0392 gene, partial cds /cds=(0,1652) /gb=AB002390 /gi=2280487 /ug=Hs.201377 /len=5422 33788_at 108.4
AF038185 Cluster Incl. AF038185:Homo sapiens clone 23700 mRNA sequence /cds=UNKNOWN /gb=AF038185 /gi=2795905 /ug=Hs.66187 /len=1540 36815_at 108.6
00108.62500 00000.12500
00108.87500 00000.25000 !
U73328 Cluster Incl. U73328:Human DLX7 (Dlx7) mRNA, complete cds /cds=(246,749) /gb=U73328 /gi=1657866 /ug=Hs.172648 /len=1393 38535_at 108.8
U00930 Cluster Incl. U00930:Human clone C4E 1.63 (CAC)n/(GTG)n repeat-containing mRNA /cds=UNKNOWN /gb=U00930 /gi=405043 /ug=Hs.204196 /len=3276 40981_at 108.8
M97676 M97676 /FEATURE= /DEFINITION=HUMHOX7 Homo sapiens (region 7) homeobox protein (HOX7) mRNA, complete cds 214_at 108.8
00109.00000 00000.12500
00109.12500 00000.12500
00109.25000 00000.12500
00109.50000 00000.25000 !
L07590 Cluster Incl. L07590:Human protein phosphatase 2A 130 kDa regulatory subunit mRNA, complete cds /cds=(504,3956) /gb=L07590 /gi=190219 /ug=Hs.28219 /len=5217 35211_at 109.5
U48251 U48251 /FEATURE= /DEFINITION=HSU48251 Homo sapiens protein kinase C-binding protein RACK7 mRNA, partial cds 842_at 109.5
(0)!00518 00109.50000 00000.25000
(1)!00519 00109.62500 00000.12500
00109.62500 00000.12500
00109.87500 00000.25000 !
Z97630 Cluster Incl. Z97630:Human DNA sequence from clone 466N1 on chromosome 22q12-13 Contains H1F0(H1 histone family, member 0) gene, 2-amino-3-ketobutyrate -CoA ligase( nuclear gene encoding mitochondrial protein), GALR3 (galanin receptor) gene, ESTs, G33386_atCpG islands /cds=(381,965) /gb=Z97630 /gi=4582128 /ug=Hs.226117 /len=2527 33386_atCpG islands /cds=(381,965) /gb=Z97630 /gi=4582128 /ug=Hs.226117 /len=2527 109.9
00110.37500 00000.50000 !
W28575 Cluster Incl. W28575:51f12 Homo sapiens cDNA /gb=W28575 /gi=1308730 /ug=Hs.8151 /len=906 38102_at 110.4
00110.50000 00000.12500
00110.62500 00000.12500
00111.00000 00000.37500 !
AF038957 Cluster Incl. AF038957:Homo sapiens translation initiation factor 4e mRNA, complete cds /cds=(58,768) /gb=AF038957 /gi=3329383 /ug=Hs.19122 /len=961 32229_at 111
AB014522 Cluster Incl. AB014522:Homo sapiens mRNA for KIAA0622 protein, partial cds /cds=(0,3869) /gb=AB014522 /gi=3327057 /ug=Hs.11238 /len=6951 39838_at 111
D63780 Cluster Incl. D63780:Homo sapiens mRNA for YSK1, complete cds /cds=(114,1394) /gb=D63780 /gi=2196444 /ug=Hs.155206 /len=2035 40104_at 111
X66899 X66899 /FEATURE=cds /DEFINITION=HSEWS H.sapiens EWS mRNA 423_at 111
00111.12500 00000.12500
00111.25000 00000.12500
00111.37500 00000.12500
00111.62500 00000.25000 !
U66676 Cluster Incl. U66676:HSU66676 Homo sapiens cDNA /gb=U66676 /gi=1906561 /ug=Hs.6129 /len=1130 40294_at 111.6
00111.87500 00000.25000 !
AB028944 Cluster Incl. AB028944:Homo sapiens mRNA for KIAA1021 protein, partial cds /cds=(0,2395) /gb=AB028944 /gi=5689372 /ug=Hs.29189 /len=6643 41491_s_at 111.8
00112.00000 00000.12500
00112.12500 00000.12500
00112.25000 00000.12500
00112.37500 00000.12500
00112.62500 00000.25000 !
AB014600 Cluster Incl. AB014600:Homo sapiens mRNA for KIAA0700 protein, partial cds /cds=(0,3393) /gb=AB014600 /gi=3327213 /ug=Hs.13999 /len=5020 39705_at 112.7
U49188 Cluster Incl. U49188:Human placenta (Diff33) mRNA, complete cds /cds=(106,1590) /gb=U49188 /gi=1293562 /ug=Hs.76329 /len=1746 37007_at 112.7
AF000652 Cluster Incl. AF000652:Homo sapiens syntenin (sycl) mRNA, complete cds /cds=(148,1044) /gb=AF000652 /gi=2795862 /ug=Hs.8180 /len=2162 38110_at 112.7
Z49254 Cluster Incl. Z49254:H.sapiens L23-related mRNA /cds=(54,515) /gb=Z49254 /gi=1478199 /ug=Hs.3254 /len=700 34358_at 112.7
00112.75000 00000.12500
00113.12500 00000.37500 !
W28330 Cluster Incl. W28330:45d4 Homo sapiens cDNA /gb=W28330 /gi=1308278 /ug=Hs.197335 /len=752 32765_f_at 113.2
Y09160 Cluster Incl. Y09160:H.sapiens Sub1.5 mRNA /cds=(435,3044) /gb=Y09160 /gi=2196871 /ug=Hs.83583 /len=3353 38445_at 113.2
00113.25000 00000.12500
00113.50000 00000.25000 !
AI803447 Cluster Incl. AI803447:tc39g04.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2067030 /clone_end=3 /gb=AI803447 /gi=5368841 /ug=Hs.77496 /len=837 37337_at 113.5
U31501 Cluster Incl. U31501:Human fragile X mental retardation syndrome related protein (FXR2) mRNA, complete cds /cds=(227,2248) /gb=U31501 /gi=1098636 /ug=Hs.52788 /len=2849 35265_at 113.5
00113.75000 00000.25000 !
L33075 L33075 /FEATURE= /DEFINITION=HUMIQGA Homo sapiens ras GTPase-activating-like protein (IQGAP1) mRNA, complete cds 1825_at 113.7
U70321 Cluster Incl. U70321:Human herpesvirus entry mediator mRNA, complete cds /cds=(293,1144) /gb=U70321 /gi=2138189 /ug=Hs.130227 /len=1698 39424_at 113.7
00113.87500 00000.12500
00114.12500 00000.25000 !
AB002386 Cluster Incl. AB002386:Human mRNA for KIAA0388 gene, complete cds /cds=(100,2343) /gb=AB002386 /gi=2224716 /ug=Hs.194669 /len=4606 32259_at 114.1
D86971 Cluster Incl. D86971:Human mRNA for KIAA0217 gene, partial cds /cds=(0,2021) /gb=D86971 /gi=1504015 /ug=Hs.78851 /len=5404 32586_at 114.1
U91932 Cluster Incl. U91932:Homo sapiens AP-3 complex sigma3A subunit mRNA, complete cds /cds=(85,666) /gb=U91932 /gi=1923269 /ug=Hs.80917 /len=1253 38074_at 114.1
00114.25000 00000.12500
00114.50000 00000.25000 !
M83822 Cluster Incl. M83822:Human beige-like protein (BGL) mRNA, partial cds /cds=(0,5758) /gb=M83822 /gi=1580780 /ug=Hs.62354 /len=7332 35371_at 114.5
U83246 Cluster Incl. U83246:Homo sapiens copine I mRNA, complete cds /cds=(156,1769) /gb=U83246 /gi=1791256 /ug=Hs.166887 /len=1965 40452_at 114.5
00114.87500 00000.37500 !
U71267 Cluster Incl. U71267:Human potential transcriptional repressor NOT4Hp (NOT4H) mRNA, complete cds /cds=(281,2209) /gb=U71267 /gi=4097897 /ug=Hs.20423 /len=3297 32820_at 114.8
00115.00000 00000.12500
00115.12500 00000.12500
00115.37500 00000.25000 !
Z24724 Cluster Incl. Z24724:H.sapiens polyA site DNA /cds=UNKNOWN /gb=Z24724 /gi=505034 /ug=Hs.4934 /len=1870 34857_at 115.3
U92315 Cluster Incl. U92315:Homo sapiens hydroxysteroid sulfotransferase SULT2B1b (HSST2) mRNA, complete cds /cds=(81,1178) /gb=U92315 /gi=1923292 /ug=Hs.94581 /len=1199 41034_s_at 115.4
D87468 Cluster Incl. D87468:Human mRNA for KIAA0278 gene, partial cds /cds=(0,1383) /gb=D87468 /gi=1944419 /ug=Hs.40888 /len=2935 36307_at 115.4
M96995 Cluster Incl. M96995:Homo sapiens epidermal growth factor receptor-binding protein GRB2 (EGFRBP-GRB2) mRNA sequence /cds=(78,731) /gb=M96995 /gi=181975 /ug=Hs.239528 /len=1109 33855_at 115.4
00115.75000 00000.37500 !
M21186 Cluster Incl. M21186:Human neutrophil cytochrome b light chain p22 phagocyte b-cytochrome mRNA, complete cds /cds=(28,615) /gb=M21186 /gi=189105 /ug=Hs.68877 /len=687 35807_at
00115.87500 00000.12500
00116.12500 00000.25000 !
W28729 Cluster Incl. W28729:50h2 Homo sapiens cDNA /gb=W28729 /gi=1308677 /ug=Hs.163863 /len=783 36398_at 116.1
00116.25000 00000.12500
00116.37500 00000.12500
00116.62500 00000.25000 !
AB019408 Cluster Incl. AB019408:Homo sapiens mRNA, expressed in fibroblasts of periodontal ligament, complete cds, clone-PDL-48 /cds=(74,550) /gb=AB019408 /gi=4587126 /ug=Hs.71187 /len=1285 35836_at 116.6
U96074 Cluster Incl. U96074:Human translation initiation factor eIF3 p44 subunit mRNA, complete cds /cds=(9,971) /gb=U96074 /gi=3264858 /ug=Hs.28081 /len=1068 34302_at 116.6
00116.87500 00000.25000 !
X54304 Cluster Incl. X54304:Human mRNA for myosin regulatory light chain /cds=(114,629) /gb=X54304 /gi=34755 /ug=Hs.233936 /len=944 33447_at 116.8
N98667 Cluster Incl. N98667:yy66d05.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-278505 /clone_end=5 /gb=N98667 /gi=1270089 /ug=Hs.106826 /len=549 39551_at 116.8
D64154 Cluster Incl. D64154:Human mRNA for Mr 110,000 antigen, complete cds /cds=(46,1269) /gb=D64154 /gi=994759 /ug=Hs.90107 /len=1375 38808_at 116.8
00117.00000 00000.12500
00117.12500 00000.12500
00117.50000 00000.37500 !
AA768912 Cluster Incl. AA768912:nz82h06.s1 Homo sapiens cDNA /clone=IMAGE-1302011 /gb=AA768912 /gi=2820150 /ug=Hs.923 /len=638 39086_g_at 117.5
00117.75000 00000.25000 !
AF075599 Cluster Incl. AF075599:Homo sapiens ubiquitin conjugating enzyme 12 (UBC12) mRNA, complete cds /cds=(3,554) /gb=AF075599 /gi=3309660 /ug=Hs.200478 /len=751 33781_s_at 117.7
AF063002 Cluster Incl. AF063002:Homo sapiens LIM protein SLIMMER mRNA, complete cds /cds=(84,1055) /gb=AF063002 /gi=3859848 /ug=Hs.75329 /len=2042 32542_at 117.7
00117.87500 00000.12500
00118.12500 00000.25000 !
X53002 Cluster Incl. X53002:Human mRNA for integrin beta-5 subunit /cds=(336,2735) /gb=X53002 /gi=33952 /ug=Hs.149846 /len=3416 39754_at 118.1
AF093771 Cluster Incl. AF093771:Homo sapiens mitoxantrone resistance protein 1 mRNA, partial sequence /cds=UNKNOWN /gb=AF093771 /gi=3747072 /ug=Hs.194720 /len=1469 33733_at 118.1
00118.25000 00000.12500
00118.87500 00000.62500 !
U09477 U09477 /FEATURE= /DEFINITION=HSU09477 Human clone 53BP1 p53-binding protein mRNA, partial cds 1711_at 118.7
M33764 M33764 /FEATURE=cds /DEFINITION=HUMSODB Human ornithine decarboxylase gene, complete cds 1081_at 118.7
00119.00000 00000.12500
00119.12500 00000.12500
00119.37500 00000.25000 !
D87434 Cluster Incl. D87434:Human mRNA for KIAA0247 gene, complete cds /cds=(268,1179) /gb=D87434 /gi=1665762 /ug=Hs.82426 /len=5338 38393_at 119.3
U17886 Cluster Incl. U17886:Human succinate dehydrogenase iron-protein subunit (sdhB) gene /cds=(133,978) /gb=U17886 /gi=773299 /ug=Hs.64 /len=1102 35751_at 119.4
AI141670 Cluster Incl. AI141670:ot08b12.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1614239 /clone_end=3 /gb=AI141670 /gi=3649127 /ug=Hs.141660 /len=562 40175_at 119.4
00119.75000 00000.37500 !
D13639 Cluster Incl. D13639:Human mRNA for KIAK0002 gene, complete cds /cds=(269,1138) /gb=D13639 /gi=285990 /ug=Hs.75586 /len=6478 36650_at 119.7
M59287 Cluster Incl. M59287:Human protein kinase mRNA /cds=UNKNOWN /gb=M59287 /gi=186757 /ug=Hs.2083 /len=1750 32833_at 119.7
AB002349 Cluster Incl. AB002349:Human mRNA for KIAA0351 gene, complete cds /cds=(267,1940) /gb=AB002349 /gi=2224642 /ug=Hs.170307 /len=6336 32685_at 119.7
AI687419 Cluster Incl. AI687419:tp95h03.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2207093 /clone_end=3 /gb=AI687419 /gi=4898713 /ug=Hs.203410 /len=286 32815_at 119.7
00119.87500 00000.12500
00120.12500 00000.25000 !
AI912041 Cluster Incl. AI912041:wd84b06.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2338259 /clone_end=3 /gb=AI912041 /gi=5631896 /ug=Hs.1197 /len=570 39353_at 120.1
AL034397 Cluster Incl. AL034397:Human DNA sequence from clone 159A1 on chromosome Xq12-13.3. Contains a novel gene and a Heterogenous Nuclear Ribonucleoprotein G (HNRNP G, Glycoprotein P43) pseudogene. Contains ESTs, an STS, GSSs, genomic marker DXS1213, a37976_atrepeat polymorphism /cds=(82,1281) /gb=AL034397 /gi=3980338 /ug=Hs.8904 /len=1807 37976_atrepeat polymorphism /cds=(82,1281) /gb=AL034397 /gi=3980338 /ug=Hs.8904 /len=1807 120.1
00120.25000 00000.12500
00120.62500 00000.37500 !
U07418 U07418 /FEATURE= /DEFINITION=HSHMLHI Human DNA mismatch repair (hmlh1) mRNA, complete cds 1850_at 120.5
L08069 Cluster Incl. L08069:Human heat shock protein, E. coli DnaJ homologue mRNA, complete cds /cds=(82,1275) /gb=L08069 /gi=306713 /ug=Hs.94 /len=1438 39118_at 120.7
00120.87500 00000.25000 !
U80760 Cluster Incl. U80760:Homo sapiens CAGH1 alternate open reading frame mRNA, complete cds /cds=(914,1330) /gb=U80760 /gi=2565088 /ug=Hs.103315 /len=1655 38648_at 120.8
W26477 Cluster Incl. W26477:30b5 Homo sapiens cDNA /gb=W26477 /gi=1307176 /ug=Hs.204196 /len=830 40980_at 120.8
00121.00000 00000.12500
00121.12500 00000.12500
00121.37500 00000.25000 !
X64229 Cluster Incl. X64229:H.sapiens dek mRNA /cds=(33,1160) /gb=X64229 /gi=30502 /ug=Hs.110713 /len=2699 38992_at 121.3
M82919 Cluster Incl. M82919:Human gamma amino butyric acid (GABAA) receptor beta-3 subunit mRNA, complete cds /cds=(53,1474) /gb=M82919 /gi=182924 /ug=Hs.1440 /len=1634 31817_at 121.3
U84720 Cluster Incl. U84720:Homo sapiens mRNA export protein (RAE1) mRNA, complete cds /cds=(187,1293) /gb=U84720 /gi=1903455 /ug=Hs.196209 /len=1654 32757_at 121.3
00121.62500 00000.25000 !
AF052728 Cluster Incl. AF052728:Homo sapiens HERG-USO (HERG) mRNA, alternatively spliced, partial cds /cds=(0,284) /gb=AF052728 /gi=3549258 /ug=Hs.165664 /len=767 38225_at 121.6
00121.75000 00000.12500
00122.12500 00000.37500 !
M84349 Cluster Incl. M84349:Human transmembrane protein (CD59) gene /cds=(18,404) /gb=M84349 /gi=180150 /ug=Hs.119663 /len=1840 39351_at 122.1
Z49835 Cluster Incl. Z49835:H.sapiens mRNA for protein disulfide isomerase /cds=(106,1623) /gb=Z49835 /gi=860985 /ug=Hs.110029 /len=1954 38986_at 122.1
00122.37500 00000.25000 !
U05596 Cluster Incl. U05596:Human anion exchanger 3 brain isoform (bAE3) mRNA, complete cds /cds=(11,3709) /gb=U05596 /gi=476221 /ug=Hs.1176 /len=3944 37489_s_at 122.3
00122.50000 00000.12500
00122.75000 00000.25000 !
AC004770 Cluster Incl. AC004770:Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the hFEN1 gene /cds=(0,1334) /gb=AC004770 /gi=3212836 /ug=Hs.132898 /len=1335 41718_g_at 122.7
00122.87500 00000.12500
00123.12500 00000.25000 !
AF032456 Cluster Incl. AF032456:Homo sapiens ubiquitin conjugating enzyme G2 (UBE2G2) mRNA, complete cds /cds=(55,552) /gb=AF032456 /gi=3004908 /ug=Hs.192853 /len=2890 32236_at 123.1
(1)!00582 00123.12500 00000.25000
(2)!00586 00123.87500 00000.25000
00125.87500 00000.37500 !
L06845 Cluster Incl. L06845:Human cysteinyl-tRNA synthetase mRNA, partial cds /cds=(0,1787) /gb=L06845 /gi=306683 /ug=Hs.159604 /len=2293 40408_at 125.8
00126.00000 00000.12500
00126.12500 00000.12500
00126.25000 00000.12500
00126.75000 00000.50000 !
W28732 Cluster Incl. W28732:50h7 Homo sapiens cDNA /gb=W28732 /gi=1308680 /ug=Hs.177496 /len=818 31503_at 126.7
00126.87500 00000.12500
00127.00000 00000.12500
00127.12500 00000.12500
00127.37500 00000.25000 !
U70451 Cluster Incl. U70451:Human myleoid differentiation primary response protein MyD88 mRNA, complete cds /cds=(32,922) /gb=U70451 /gi=1763090 /ug=Hs.82116 /len=2656 38369_at 127.2
U69559 Cluster Incl. U69559:U69559 Homo sapiens cDNA /clone=26077 /gb=U69559 /gi=2731390 /ug=Hs.96334 /len=1969 39150_at 127.2
U44772 Cluster Incl. U44772:Human palmitoyl protein thioesterase mRNA, complete cds /cds=(13,933) /gb=U44772 /gi=1314354 /ug=Hs.3873 /len=2279 34774_at 127.2
D31889 Cluster Incl. D31889:Human mRNA for KIAA0072 gene, partial cds /cds=(0,1513) /gb=D31889 /gi=505105 /ug=Hs.193725 /len=3346 32240_at 127.2
00127.50000 00000.12500
00127.62500 00000.12500
00127.75000 00000.12500
00128.00000 00000.25000 !
W28595 Cluster Incl. W28595:48h8 Homo sapiens cDNA /gb=W28595 /gi=1308543 /ug=Hs.5542 /len=957 41799_at 128
00128.12500 00000.12500
00128.37500 00000.25000 !
L37042 Cluster Incl. L37042:Homo sapiens casein kinase I alpha isoform (CSNK1A1) mRNA, complete cds /cds=(211,1224) /gb=L37042 /gi=852054 /ug=Hs.144477 /len=1399 40184_at 128.3
AJ132637 Cluster Incl. AJ132637:Homo sapiens mRNA for ATP-dependent metalloprotease YME1L /cds=(183,2333) /gb=AJ132637 /gi=5689741 /ug=Hs.206521 /len=3858 40988_at 128.3
Z78324 Cluster Incl. Z78324:HSZ78324 Homo sapiens cDNA /clone=2.45-(CEPH) /gb=Z78324 /gi=1495097 /ug=Hs.132969 /len=815 39437_at 128.3
00128.50000 00000.12500
00128.62500 00000.12500
00128.75000 00000.12500
00129.12500 00000.37500 !
Y16788 Cluster Incl. Y16788:Homo sapiens hHa3-I gene, complete CDS /cds=(0,1214) /gb=Y16788 /gi=3724100 /ug=Hs.197874 /len=1215 31594_at 129.1
AF057140 Cluster Incl. AF057140:Homo sapiens cargo selection protein TIP47 (TIP47) mRNA, complete cds /cds=(74,1378) /gb=AF057140 /gi=3095185 /ug=Hs.140452 /len=1974 40169_at 129.1
H24861 Cluster Incl. H24861:yl42e11.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-160940 /clone_end=5 /gb=H24861 /gi=893760 /ug=Hs.90145 /len=517 33168_at 129.1
D14686 Cluster Incl. D14686:Human gene for glycine cleavage system T-protein /cds=(145,1356) /gb=D14686 /gi=994760 /ug=Hs.102 /len=2119 41120_at 129.1
00129.37500 00000.25000 !
L76571 Cluster Incl. L76571:Homo sapiens nuclear hormone receptor (shp) gene, 3 end of cds /cds=(0,772) /gb=L76571 /gi=1374878 /ug=Hs.11930 /len=773 37505_at 129.3
(2)!00614 00129.37500 00000.25000
(3)!00618 00130.37500 00000.12500
00130.37500 00000.12500
00130.62500 00000.25000 !
M86546 Cluster Incl. M86546:H.sapiens PBX1a and PBX1b mRNA, complete cds /cds=(123,1415) /gb=M86546 /gi=189647 /ug=Hs.155691 /len=1819 32063_at 130.6
00130.75000 00000.12500
00131.00000 00000.25000 !
AA977580 Cluster Incl. AA977580:on61b02.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1561131 /clone_end=3 /gb=AA977580 /gi=3155026 /ug=Hs.24550 /len=490 33881_at 131
M31724 M31724 /FEATURE=mRNA /DEFINITION=HUMPTPBX Human phosphotyrosyl-protein phosphatase (PTP-1B) mRNA, complete cds 588_at 131
D10495 Cluster Incl. D10495:Homo sapiens mRNA for protein kinase C delta-type, complete cds /cds=(9,1889) /gb=D10495 /gi=520586 /ug=Hs.155342 /len=2163 32046_at 131
00131.50000 00000.50000 !
Y10387 Cluster Incl. Y10387:H.sapiens mRNA for PAPS synthetase /cds=(36,1910) /gb=Y10387 /gi=2673861 /ug=Hs.3833 /len=2493 34411_at 131.5
U56418 Cluster Incl. U56418:Human lysophosphatidic acid acyltransferase-beta mRNA, complete cds /cds=(39,875) /gb=U56418 /gi=2155239 /ug=Hs.209119 /len=1356 32837_at 131.5
00131.62500 00000.12500
00132.00000 00000.37500 !
AF063605 Cluster Incl. AF063605:Homo sapiens brain my047 protein mRNA, complete cds /cds=(84,479) /gb=AF063605 /gi=4071360 /ug=Hs.11000 /len=2683 38985_at 131.9
M63167 M63167 /FEATURE= /DEFINITION=HUMRACPC Human rac protein kinase alpha mRNA, complete cds 1564_at 131.9
00132.12500 00000.12500
00132.25000 00000.12500
00132.37500 00000.12500
00132.62500 00000.25000 !
X63753 Cluster Incl. X63753:H.sapiens son-a mRNA /cds=(414,4985) /gb=X63753 /gi=36545 /ug=Hs.92909 /len=5675 39097_at 132.6
AA669799 Cluster Incl. AA669799:ag36c04.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1118886 /clone_end=3 /gb=AA669799 /gi=2631298 /ug=Hs.6315 /len=679 36553_at 132.6
00132.75000 00000.12500
00132.87500 00000.12500
00133.12500 00000.25000 !
D50525 Cluster Incl. D50525:Human mRNA for TI-227H /cds=UNKNOWN /gb=D50525 /gi=1167502 /ug=Hs.184914 /len=3911 33683_at 133.1
U66346 Cluster Incl. U66346:Homo sapiens cAMP phosphodiesterase (PDE4C) mRNA, 4C-791 isoform, partial cds /cds=(0,2377) /gb=U66346 /gi=2706886 /ug=Hs.189 /len=2755 38860_at 133.1
00133.50000 00000.37500 !
N99340 Cluster Incl. N99340:IMAGE-20074 Homo sapiens cDNA /clone=IMAGE-20074 /gb=N99340 /gi=1270755 /ug=Hs.7357 /len=1110 36095_at 133.5
00133.62500 00000.12500
00133.75000 00000.12500
00134.00000 00000.25000 !
M34668 M34668 /FEATURE= /DEFINITION=HUMPTPAAA Human protein tyrosine phosphatase (PTPase-alpha) mRNA 1496_at 134
00134.25000 00000.25000 !
U37055 U37055 /FEATURE=mRNA /DEFINITION=HSU37055 Human hepatocyte growth factor-like protein gene, complete cds 1047_s_at 134.2
AL039458 Cluster Incl. AL039458:DKFZp434N0910_s1 Homo sapiens cDNA, 3 end /clone=DKFZp434N0910 /clone_end=3 /gb=AL039458 /gi=5408506 /ug=Hs.4193 /len=849 34800_at 134.2
00134.37500 00000.12500
00134.75000 00000.37500 !
HG2259-HT2348 Tubulin, Alpha 1, Isoform 44 330_s_at 134.8
AI761818 Cluster Incl. AI761818:wi62g02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2394866 /clone_end=3 /gb=AI761818 /gi=5177409 /ug=Hs.2969 /len=521 41500_at 134.8
X56777 Cluster Incl. X56777:H.sapiens mRNA for ZP3 gene /cds=(30,1148) /gb=X56777 /gi=297790 /ug=Hs.144645 /len=1315 39720_g_at 134.8
AL031775 Cluster Incl. AL031775:dJ30M3.3 (novel protein similar to C. elegans Y63D3A.4) /cds=(17,1105) /gb=AL031775 /gi=4071041 /ug=Hs.46847 /len=1917 34825_at 134.8
00134.87500 00000.12500
00135.25000 00000.37500 !
S53911 S53911 /FEATURE= /DEFINITION=S53911 CD34=glycoprotein expressed in lymphohematopoietic progenitor cells {alternatively spliced, truncated form} [human, UT7, mRNA, 2657 nt] 538_at 135.3
U14193 U14193 /FEATURE= /DEFINITION=HSU14193 Human TFIIA gamma subunit mRNA, complete cds 869_at 135.3
00135.37500 00000.12500
00135.50000 00000.12500
00135.87500 00000.37500 !
L03532 Cluster Incl. L03532:Human M4 protein mRNA, complete cds /cds=(11,2200) /gb=L03532 /gi=187280 /ug=Hs.79024 /len=2457 37717_at 136
00136.12500 00000.25000 !
L03532 Cluster Incl. L03532:Human M4 protein mRNA, complete cds /cds=(11,2200) /gb=L03532 /gi=187280 /ug=Hs.79024 /len=2457 37717_at 136
00136.25000 00000.12500
00136.50000 00000.25000 !
U02556 Cluster Incl. U02556:Human RP3 mRNA, complete cds /cds=(68,418) /gb=U02556 /gi=413824 /ug=Hs.75307 /len=2156 36921_at 136.6
U19599 U19599 /FEATURE= /DEFINITION=HSU19599 Human (BAX delta) mRNA, complete cds 1998_i_at 136.6
00136.75000 00000.25000 !
NM_006297 NM_006297 /FEATURE=mRNA /DEFINITION=Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 1 (XRCC1), mRNA /NOTE=replacement of probe set 1829_at 160033_s_at 136.8
X91247 Cluster Incl. X91247:H.sapiens mRNA for thioredoxin reductase /cds=(439,1932) /gb=X91247 /gi=1237037 /ug=Hs.13046 /len=3826 39425_at 136.8
00136.87500 00000.12500
00137.00000 00000.12500
00137.25000 00000.25000 !
AB014538 Cluster Incl. AB014538:Homo sapiens mRNA for KIAA0638 protein, partial cds /cds=(0,3706) /gb=AB014538 /gi=3327089 /ug=Hs.77864 /len=4915 37375_at 137.2
D80005 Cluster Incl. D80005:Human mRNA for KIAA0183 gene, partial cds /cds=(0,3190) /gb=D80005 /gi=1136425 /ug=Hs.76666 /len=4905 37031_at 137.2
AF068706 Cluster Incl. AF068706:Homo sapiens gamma2-adaptin (G2AD) mRNA, complete cds /cds=(763,3018) /gb=AF068706 /gi=3193225 /ug=Hs.8991 /len=3312 38799_at 137.2
Y08134 Cluster Incl. Y08134:H.sapiens mRNA for ASM-like phosphodiesterase 3b /cds=(121,1518) /gb=Y08134 /gi=1552274 /ug=Hs.123659 /len=1610 37779_at 137.2
00137.37500 00000.12500
00137.87500 00000.50000 !
J04444 J04444 /FEATURE=cds /DEFINITION=HUMCYC1A Human cytochrome c-1 gene, complete cds 1160_at 137.8
00138.00000 00000.12500
00138.12500 00000.12500
00138.25000 00000.12500
00138.37500 00000.12500
00138.62500 00000.25000 !
U83598 Cluster Incl. U83598:Human death domain receptor 3 soluble form (DDR3) mRNA, partial cds /cds=(0,529) /gb=U83598 /gi=1800294 /ug=Hs.180338 /len=816 41190_at 138.5
AF047438 Cluster Incl. AF047438:Homo sapiens GOS28/P28 protein mRNA, complete cds /cds=(11,778) /gb=AF047438 /gi=3335131 /ug=Hs.8868 /len=994 40725_at 138.7
00138.75000 00000.12500
00138.87500 00000.12500
00139.12500 00000.25000 !
U62325 Cluster Incl. U62325:Human FE65-like protein (hFE65L) mRNA, partial cds /cds=(0,2194) /gb=U62325 /gi=1657751 /ug=Hs.15740 /len=2896 40148_at 139.2
00139.50000 00000.37500 !
U65093 Cluster Incl. U65093:Human msg1-related gene 1 (mrg1) mRNA, complete cds /cds=(199,840) /gb=U65093 /gi=1853998 /ug=Hs.82071 /len=899 33113_at 139.5
AB014562 Cluster Incl. AB014562:Homo sapiens mRNA for KIAA0662 protein, partial cds /cds=(0,2034) /gb=AB014562 /gi=3327137 /ug=Hs.93868 /len=3944 39117_at 139.5
00139.62500 00000.12500
00139.75000 00000.12500
(3)!00662 00139.62500 00000.12500
(4)!00666 00140.37500 00000.12500
00140.37500 00000.12500
00140.75000 00000.37500 !
U37352 Cluster Incl. U37352:Human protein phosphatase 2A Balpha1 regulatory subunit mRNA, complete cds /cds=(88,1632) /gb=U37352 /gi=1203811 /ug=Hs.171734 /len=4064 40786_at 140.7
AI953789 Cluster Incl. AI953789:wx69d10.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2548915 /clone_end=3 /gb=AI953789 /gi=5746099 /ug=Hs.75742 /len=813 36683_at 140.7
00140.87500 00000.12500
00141.12500 00000.25000 !
X99142 Cluster Incl. X99142:H.sapiens mRNA for hair keratin, hHb6 /cds=(0,1451) /gb=X99142 /gi=1903219 /ug=Hs.182508 /len=2028 32329_at 141.1
AF091085 Cluster Incl. AF091085:Homo sapiens clone 638 unknown mRNA, complete sequence /cds=(91,687) /gb=AF091085 /gi=3860007 /ug=Hs.169992 /len=836 40514_at 141.1
00141.25000 00000.12500
00141.50000 00000.25000 !
AF015128 Cluster Incl. AF015128:Homo sapiens IgG heavy chain variable region (Vh26) mRNA, partial cds /cds=(0,176) /gb=AF015128 /gi=2367522 /ug=Hs.135635 /len=374 35566_f_at 141.5
00141.75000 00000.25000 !
U79291 Cluster Incl. U79291:Human clone 23721 mRNA sequence /cds=UNKNOWN /gb=U79291 /gi=1710271 /ug=Hs.83572 /len=1342 38443_at 141.6
00141.87500 00000.12500
00142.12500 00000.25000 !
AF013512 Cluster Incl. AF013512:untitled /cds=(106,1551) /gb=AF013512 /gi=2653816 /ug=Hs.154078 /len=1887 35013_at 142.1
D87673 D87673 /FEATURE= /DEFINITION=D87673 Homo sapiens mRNA for heat shock transcription factor 4, complete cds 720_at 142.1
00142.37500 00000.25000 !
AA461365 Cluster Incl. AA461365:zx70e07.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-796836 /clone_end=5 /gb=AA461365 /gi=2186485 /ug=Hs.237742 /len=591 39271_at 142.3
00142.50000 00000.12500
00142.75000 00000.25000 !
AF001461 Cluster Incl. AF001461:Homo sapiens Kruppel-like zinc finger protein Zf9 mRNA, complete cds /cds=(30,881) /gb=AF001461 /gi=3378030 /ug=Hs.76526 /len=1354 37026_at 142.7
00143.12500 00000.37500 !
U67156 U67156 /FEATURE= /DEFINITION=HSU67156 Human mitogen-activated kinase kinase kinase 5 (MAPKKK5) mRNA, complete cds 1327_s_at 143.1
AB014609 Cluster Incl. AB014609:Homo sapiens mRNA for KIAA0709 protein, complete cds /cds=(116,4555) /gb=AB014609 /gi=3327231 /ug=Hs.7835 /len=5641 37408_at 143.1
AF012108 Cluster Incl. AF012108:Homo sapiens Amplified in Breast Cancer (AIB1) mRNA, complete cds /cds=(200,4462) /gb=AF012108 /gi=2331249 /ug=Hs.225977 /len=6818 33381_at 143.1
00143.25000 00000.12500
00143.50000 00000.25000 !
L32832 Cluster Incl. L32832:Homo sapiens zinc finger homeodomain protein (ATBF1-A) mRNA, complete cds /cds=(673,11784) /gb=L32832 /gi=976346 /ug=Hs.101842 /len=11893 37114_at 143.6
00143.75000 00000.25000 !
Y08200 Y08200 /FEATURE= /DEFINITION=HSRABGTRA Homo sapiens mRNA for rab geranylgeranyl transferase, alpha-subunit 100_g_at 143.7
U85611 U85611 /FEATURE= /DEFINITION=HSU85611 Human DNA-PK interaction protein (KIP) mRNA, complete cds 1020_s_at 143.7
00143.87500 00000.12500
00144.12500 00000.25000 !
X80907 Cluster Incl. X80907:H.sapiens mRNA for p85 beta subunit of phosphatidyl-inositol-3-kinase /cds=(241,2427) /gb=X80907 /gi=2160047 /ug=Hs.211586 /len=3201 34197_at 144.2
00144.37500 00000.25000 !
00144.50000 00000.12500
00144.62500 00000.12500
00144.87500 00000.25000 !
J02939 Cluster Incl. J02939:Human membrane glycoprotein 4F2 antigen heavy chain mRNA /cds=(109,1698) /gb=J02939 /gi=182864 /ug=Hs.79748 /len=1863 38029_at 144.9
00145.00000 00000.12500
00145.12500 00000.12500
00145.50000 00000.37500 !
AA780049 Cluster Incl. AA780049:zj24f06.s1 Homo sapiens cDNA, 3 end /clone=451235 /clone_end=3 /gb=AA780049 /gi=2839380 /ug=Hs.173987 /len=587 40615_at 145.5
AF057297 Cluster Incl. AF057297:Homo sapiens ornithine decarboxylase antizyme 2 (OAZ2) mRNA, complete cds /cds=UNKNOWN /gb=AF057297 /gi=3766169 /ug=Hs.74563 /len=1850 36146_at 145.5
00145.75000 00000.25000 !
X57398 Cluster Incl. X57398:Human mRNA for pM5 protein /cds=(0,3572) /gb=X57398 /gi=35526 /ug=Hs.227823 /len=4086 33414_at 145.7
AL021396 Cluster Incl. AL021396:Human DNA sequence from clone 971N18 on chromosome 20p12 Contains processed pseudogene PHKBP1, novel gene, ESTs, CA repeat (D20S907), STSs and GSSs /cds=(0,790) /gb=AL021396 /gi=4490930 /ug=Hs.169358 /len=2059 40478_at 145.7
AJ010346 Cluster Incl. AJ010346:Homo sapiens mRNA for RING-H2 protein RNF6, alternative exon 1a /cds=(360,2417) /gb=AJ010346 /gi=4583651 /ug=Hs.32597 /len=3503 35656_at 145.7
00145.87500 00000.12500
00146.12500 00000.25000 !
X13839 Cluster Incl. X13839:Human mRNA for vascular smooth muscle alpha-actin /cds=(47,1180) /gb=X13839 /gi=28329 /ug=Hs.195851 /len=1330 32755_at 146.1
00146.25000 00000.12500
00146.62500 00000.37500 !
AB014595 Cluster Incl. AB014595:Homo sapiens mRNA for KIAA0695 protein, complete cds /cds=(78,2231) /gb=AB014595 /gi=3327203 /ug=Hs.155976 /len=4376 40141_at 146.5
00146.87500 00000.25000 !
U04953 Cluster Incl. U04953:Human isoleucyl-tRNA synthetase mRNA, complete cds /cds=(255,4043) /gb=U04953 /gi=450850 /ug=Hs.172801 /len=4508 40827_at 146.8
00147.00000 00000.12500
00147.12500 00000.12500
00147.37500 00000.25000 !
U94888 Cluster Incl. U94888:Homo sapiens CC-chemokine receptor 10 (CCR10) mRNA, complete cds /cds=(15,1169) /gb=U94888 /gi=2213808 /ug=Hs.117572 /len=1238 32484_at 147.3
00147.87500 00000.50000 !
D43642 Cluster Incl. D43642:Human YL-1 mRNA for YL-1 protein (nuclear protein with DNA-binding ability), complete cds /cds=(43,1137) /gb=D43642 /gi=806519 /ug=Hs.2430 /len=1324 33873_at 147.8
U66616 U66616 /FEATURE= /DEFINITION=HSU66616 Human SWI/SNF complex 170 KDa subunit (BAF170) mRNA, complete cds 453_at 147.8
AF017656 Cluster Incl. AF017656:Homo sapiens G protein beta 5 subunit mRNA, complete cds /cds=(99,1160) /gb=AF017656 /gi=2570403 /ug=Hs.155090 /len=1471 38176_at 147.9
AI147237 Cluster Incl. AI147237:qb36f02.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1698363 /clone_end=3 /gb=AI147237 /gi=3674919 /ug=Hs.210732 /len=474 34105_f_at 147.9
00148.12500 00000.25000 !
S69272 Cluster Incl. S69272:cytoplasmic antiproteinase=38 kda intracellular serine proteinase inhibitor [human, placenta, mRNA, 1465 nt] /cds=(188,1318) /gb=S69272 /gi=546087 /ug=Hs.41072 /len=1465 34789_at 148.1
L22005 L22005 /FEATURE= /DEFINITION=HUMCDC34H Human ubiquitin conjugating enzyme mRNA, partial cds 1273_r_at 148.1
00148.37500 00000.25000 !
L35594 Cluster Incl. L35594:Human autotaxin mRNA, complete cds /cds=(49,2796) /gb=L35594 /gi=537905 /ug=Hs.174185 /len=3231 41123_s_at 148.3
AB014533 Cluster Incl. AB014533:Homo sapiens mRNA for KIAA0633 protein, partial cds /cds=(0,3951) /gb=AB014533 /gi=3327079 /ug=Hs.33010 /len=5289 35669_at 148.4
00148.50000 00000.12500
00148.62500 00000.12500
00148.87500 00000.25000 !
U09002 Cluster Incl. U09002:Human N-methyl-D-aspartate receptor modulatory subunit 2A (hNR2A) mRNA, complete cds /cds=(155,4549) /gb=U09002 /gi=558748 /ug=Hs.167464 /len=6137 38236_at 148.7
M12174 M12174 /FEATURE= /DEFINITION=HUMRHOA Human ras-related rho mRNA (clone 6), partial cds 1826_at 148.9
00149.00000 00000.12500
00149.25000 00000.25000 !
D88153 Cluster Incl. D88153:Homo sapiens mRNA for HYA22, complete cds /cds=(147,1169) /gb=D88153 /gi=2289785 /ug=Hs.147189 /len=4763 40196_at 149.2
00149.37500 00000.12500
00149.50000 00000.12500
00149.75000 00000.25000 !
AF082657 Cluster Incl. AF082657:Homo sapiens Era GTPase A protein (HERA-A) mRNA, partial cds /cds=(0,1332) /gb=AF082657 /gi=3415108 /ug=Hs.3426 /len=1839 34379_at 149.7
00149.87500 00000.12500
00150.12500 00000.25000 !
U09510 Cluster Incl. U09510:Human glycyl-tRNA synthetase mRNA, complete cds /cds=(364,2421) /gb=U09510 /gi=595304 /ug=Hs.75280 /len=2462 36581_at 150.1
00150.37500 00000.25000 !
U56998 U56998 /FEATURE= /DEFINITION=HSU56998 Human putative serine/threonine protein kinase PRK (prk) mRNA, complete cds 806_at 150.2
00150.50000 00000.12500
00150.62500 00000.12500
00150.87500 00000.25000 !
D87076 Cluster Incl. D87076:Human mRNA for KIAA0239 gene, partial cds /cds=(0,1716) /gb=D87076 /gi=1510152 /ug=Hs.9729 /len=5630 38342_at 150.8
00151.00000 00000.12500
00151.12500 00000.12500
00151.25000 00000.12500
00151.75000 00000.50000 !
AF018631 Cluster Incl. AF018631:untitled /cds=(35,1666) /gb=AF018631 /gi=2674074 /ug=Hs.78885 /len=1996 37274_at 151.7
00151.87500 00000.12500
00152.12500 00000.25000 !
U23946 U23946 /FEATURE= /DEFINITION=HSU23946 Human putative tumor suppressor (LUCA15) mRNA, complete cds 1556_at 152.1
00152.25000 00000.12500
00152.50000 00000.25000 !
U61397 U61397 /FEATURE= /DEFINITION=HSU61397 Human ubiquitin-homology domain protein PIC1 mRNA, complete cds 155_s_at 152.5
00152.62500 00000.12500
00153.12500 00000.50000 !
AJ007509 Cluster Incl. AJ007509:Homo sapiens mRNA for E1B-55kDa-associated protein /cds=(173,2743) /gb=AJ007509 /gi=3319955 /ug=Hs.155218 /len=3513 40106_at 153
00153.87500 00000.75000 !
Z37986 Cluster Incl. Z37986:H.sapiens mRNA for phenylalkylamine binding protein /cds=(111,803) /gb=Z37986 /gi=780262 /ug=Hs.75105 /len=1061 32536_at 154
L10333 Cluster Incl. L10333:Homo sapiens neuroendocrine-specific protein A (NSP) mRNA, complete cds /cds=(122,2452) /gb=L10333 /gi=307306 /ug=Hs.99947 /len=3202 39178_at 154
00154.12500 00000.25000 !
M92843 Cluster Incl. M92843:H.sapiens zinc finger transcriptional regulator mRNA, complete cds /cds=(59,1039) /gb=M92843 /gi=183442 /ug=Hs.1665 /len=1746 40448_at 154.1
00154.37500 00000.25000 !
AB000584 AB000584 /FEATURE= /DEFINITION=AB000584 Homo sapiens mRNA for TGF-beta superfamily protein, complete cds 1890_at 154.3
00154.50000 00000.12500
00154.62500 00000.12500
00154.87500 00000.25000 !
M13995 M13995 /FEATURE=mRNA /DEFINITION=HUMBCL2B Human B-cell leukemia/lymphoma 2 (bcl-2) proto-oncogene mRNA encoding bcl-2-beta protein, complete cds 2060_at 154.7
U79725 Cluster Incl. U79725:Human A33 antigen precursor mRNA, complete cds /cds=(344,1303) /gb=U79725 /gi=1814276 /ug=Hs.143131 /len=2793 37875_at 154.7
00155.00000 00000.12500
00155.12500 00000.12500
00155.25000 00000.12500
00155.50000 00000.25000 !
U89278 Cluster Incl. U89278:Human polyhomeotic 2 homolog (HPH2) mRNA, complete cds /cds=(8,1309) /gb=U89278 /gi=1877500 /ug=Hs.75878 /len=2541 36960_at 155.5
AF005050 Cluster Incl. AF005050:Homo sapiens aspartyl aminopeptidase mRNA, complete cds /cds=(170,1588) /gb=AF005050 /gi=4101588 /ug=Hs.108117 /len=1694 38703_at 155.5
00155.75000 00000.25000 !
AI742846 Cluster Incl. AI742846:wg46h09.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2368193 /clone_end=3 /gb=AI742846 /gi=5111134 /ug=Hs.9006 /len=826 38801_at 155.7
00155.87500 00000.12500
00156.25000 00000.37500 !
AJ237672 Cluster Incl. AJ237672:Homo sapiens mRNA for methylenetetrahydrofolate reductase /cds=(60,2099) /gb=AJ237672 /gi=4753777 /ug=Hs.214142 /len=2313 32897_at 156.2
00156.37500 00000.12500
00156.50000 00000.12500
00156.75000 00000.25000 !
AF052142 Cluster Incl. AF052142:Homo sapiens clone 24665 mRNA sequence /cds=UNKNOWN /gb=AF052142 /gi=3360451 /ug=Hs.90063 /len=1486 38803_at 156.7
00156.87500 00000.12500
00157.25000 00000.37500 !
M64174 Cluster Incl. M64174:Human protein-tyrosine kinase (JAK1) mRNA, complete cds /cds=(75,3503) /gb=M64174 /gi=190734 /ug=Hs.50651 /len=3541 41594_at 157.2
X00351 X00351 Human mRNA for beta-actin (_5, _M, _3 represent transcript regions 5 prime, Middle, and 3 prime respectively) AFFX-HSAC07/X00351_3_st 157.2
U18291 Cluster Incl. U18291:Human CDC16Hs mRNA, complete cds /cds=(24,1883) /gb=U18291 /gi=603230 /ug=Hs.1592 /len=2034 40404_s_at 157.2
00157.37500 00000.12500
00157.87500 00000.50000 !
AC004084 Cluster Incl. AC004084:Homo sapiens BAC clone RG158O17 from 7q22-q31.1 /cds=(0,2480) /gb=AC004084 /gi=2822156 /ug=Hs.184367 /len=2481 32177_s_at 157.8
00158.00000 00000.12500
00158.25000 00000.25000 !
D21089 D21089 /FEATURE= /DEFINITION=HUMXPCR Human mRNA for XP-C repair complementing protein (p125), complete cds 1873_at 158.2
00158.37500 00000.12500
00158.62500 00000.25000 !
X92857 Cluster Incl. X92857:H.sapiens mRNA for NFI/CAAT-binding transcription factor 5 (CTF5) /cds=(24,1310) /gb=X92857 /gi=1359829 /ug=Hs.184771 /len=1504 33329_at 158.6
00158.75000 00000.12500
00159.00000 00000.25000 !
D42138 D42138 /FEATURE= /DEFINITION=D42138 Homo sapiens mRNA for PIG-B, complete cds 314_at 158.9
00159.12500 00000.12500
00159.25000 00000.12500
00159.50000 00000.25000 !
U35113 Cluster Incl. U35113:Human metastasis-associated mta1 mRNA, complete cds /cds=(32,2179) /gb=U35113 /gi=1008543 /ug=Hs.101448 /len=2640 38633_at 159.5
00159.62500 00000.12500
00160.00000 00000.37500 !
U46194 U46194 /FEATURE= /DEFINITION=HSU46194 Human renal cell carcinoma antigen RAGE-4 mRNA, complete putative cds 1524_at 159.9
AB020682 Cluster Incl. AB020682:Homo sapiens mRNA for KIAA0875 protein, partial cds /cds=(0,1866) /gb=AB020682 /gi=4240238 /ug=Hs.184227 /len=4168 32169_at 159.9
00160.12500 00000.12500
00160.50000 00000.37500 !
M90683 Cluster Incl. M90683:Human lymphocyte antigen (HLA-G1) mRNA, complete cds /cds=(0,1016) /gb=M90683 /gi=184209 /ug=Hs.73885 /len=1147 40370_f_at 160.5
U75968 Cluster Incl. U75968:Human clone C3 CHL1 protein (CHLR1) mRNA, alternatively spliced, complete cds /cds=(220,1086) /gb=U75968 /gi=1666894 /ug=Hs.166048 /len=4182 31935_s_at 160.5
AJ131186 Cluster Incl. AJ131186:Homo sapiens mRNA for nuclear matrix protein NMP200 /cds=(207,1721) /gb=AJ131186 /gi=5689737 /ug=Hs.173980 /len=2167 33230_at 160.5
00160.75000 00000.25000 !
AI701049 Cluster Incl. AI701049:wc78b08.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2324727 /clone_end=3 /gb=AI701049 /gi=4988949 /ug=Hs.183738 /len=712 32148_at 160.7
00161.00000 00000.25000 !
Y09836 Cluster Incl. Y09836:H.sapiens mRNA for 3UTR of unknown protein /cds=UNKNOWN /gb=Y09836 /gi=1743253 /ug=Hs.82503 /len=1420 38396_at 160.9
00161.12500 00000.12500
00161.25000 00000.12500
00161.37500 00000.12500
00161.62500 00000.25000 !
N36295 Cluster Incl. N36295:yx99b12.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-269855 /clone_end=5 /gb=N36295 /gi=1157437 /ug=Hs.108973 /len=660 38725_s_at 161.6
00161.75000 00000.12500
00161.87500 00000.12500
00162.12500 00000.25000 !
M74002 Cluster Incl. M74002:Human arginine-rich nuclear protein mRNA, complete cds /cds=(83,1537) /gb=M74002 /gi=178996 /ug=Hs.184571 /len=2736 32183_at 162.1
00162.25000 00000.12500
00162.37500 00000.12500
00162.62500 00000.25000 !
AL035304 Cluster Incl. AL035304:H.sapiens gene from PAC 295C6, similar to rat PO44 /cds=(159,542) /gb=AL035304 /gi=4200231 /ug=Hs.76285 /len=798 37000_at 162.6
00162.87500 00000.25000 !
D38498 D38498 /FEATURE= /DEFINITION=HUMPMS1A Human PMS5 mRNA (yeast mismatch repair gene PMS1 homologue), partial cds (C-terminal region) 1875_f_at 162.8
(4)!00771 00162.62500 00000.25000
Entrez Gene References
(5)!00780 00164.75000 00000.50000
00164.75000 00000.50000 !
AB014539 Cluster Incl. AB014539:Homo sapiens mRNA for KIAA0639 protein, partial cds /cds=(0,1724) /gb=AB014539 /gi=3327091 /ug=Hs.15711 /len=4950 32079_at 164.7
00164.87500 00000.12500
00165.12500 00000.25000 !
00165.25000 00000.12500
00165.50000 00000.25000 !
Y08837 Y08837 /FEATURE= /DEFINITION=HSRAD51LP Homo sapiens mRNA for RAD51-like protein (XRCC2) 1300_at 165.8
X52730 Cluster Incl. X52730:Human gene for phenylethanolamine N-methylase (PNMT) (EC 2.1.1.28) /cds=(23,871) /gb=X52730 /gi=35560 /ug=Hs.1892 /len=954 32352_at 165.8
X76061 Cluster Incl. X76061:H.sapiens p130 mRNA for 130K protein /cds=(69,3488) /gb=X76061 /gi=416030 /ug=Hs.79362 /len=4835 32597_at 165.8
00165.62500 00000.12500
00166.25000 00000.62500 !
D10522 Cluster Incl. D10522:Homo sapiens mRNA for 80K-L protein, complete cds /cds=(369,1367) /gb=D10522 /gi=219893 /ug=Hs.75607 /len=2589 32434_at 166.2
00166.37500 00000.12500
00166.75000 00000.37500 !
AB011144 Cluster Incl. AB011144:Homo sapiens mRNA for KIAA0572 protein, partial cds /cds=(0,5620) /gb=AB011144 /gi=3043667 /ug=Hs.168481 /len=5755 40469_at 166.5
00166.87500 00000.12500
00167.25000 00000.37500 !
M27492 M27492 /FEATURE= /DEFINITION=HUMIL1RA Human interleukin 1 receptor mRNA, complete cds 1368_at 167.2
Z35307 Cluster Incl. Z35307:H.sapiens mRNA for endothelin-converting-enzyme 1 /cds=(37,2298) /gb=Z35307 /gi=535181 /ug=Hs.181406 /len=2720 41726_at 167.2
M33146 Cluster Incl. M33146:Human cysteine-rich peptide mRNA, complete cds /cds=(35,616) /gb=M33146 /gi=181070 /ug=Hs.108080 /len=1797 38700_at 167.2
U02619 Cluster Incl. U02619:Human TFIIIC Box B-binding subunit mRNA, complete cds /cds=(60,6389) /gb=U02619 /gi=414932 /ug=Hs.331 /len=6996 35671_at 167.2
00167.37500 00000.12500
00167.62500 00000.25000 !
AB028960 Cluster Incl. AB028960:Homo sapiens mRNA for KIAA1037 protein, partial cds /cds=(0,1467) /gb=AB028960 /gi=5689410 /ug=Hs.172825 /len=5091 40829_at 167.5
00167.87500 00000.25000 !
00168.25000 00000.37500 !
AB019527 Cluster Incl. AB019527:Homo sapiens mRNA for LDOC1 protein, complete cds /cds=(104,544) /gb=AB019527 /gi=3869126 /ug=Hs.45231 /len=1370 39967_at 168.2
M26326 Cluster Incl. M26326:Human keratin 18 mRNA, complete cds /cds=(51,1343) /gb=M26326 /gi=186690 /ug=Hs.65114 /len=1412 35766_at 168.2
00168.37500 00000.12500
00168.50000 00000.12500
00168.75000 00000.25000 !
U20428 Cluster Incl. U20428:Human SNC19 mRNA sequence /cds=UNKNOWN /gb=U20428 /gi=1890631 /ug=Hs.56937 /len=2889 35309_at 168.7
AF006043 Cluster Incl. AF006043:Homo sapiens 3-phosphoglycerate dehydrogenase mRNA, complete cds /cds=(692,2293) /gb=AF006043 /gi=2674061 /ug=Hs.3343 /len=2467 34367_at 168.7
00168.87500 00000.12500
00169.25000 00000.37500 !
AF045458 Cluster Incl. AF045458:Homo sapiens serine/threonine kinase ULK1 (ULK1) mRNA, complete cds /cds=(268,3420) /gb=AF045458 /gi=3435113 /ug=Hs.47061 /len=5211 34827_at 169.1
00169.37500 00000.12500
00169.62500 00000.25000 !
X59350 Cluster Incl. X59350:H.sapiens mRNA for B cell membrane protein CD22 /cds=(56,2599) /gb=X59350 /gi=36090 /ug=Hs.171763 /len=3250 38521_at 169.6
00169.75000 00000.12500
00169.87500 00000.12500
00170.12500 00000.25000 !
L27943 L27943 /FEATURE=mRNA /DEFINITION=HUMCYDE Homo sapiens cytidine deaminase (CDA) mRNA, complete cds 1117_at 170.1
U51336 Cluster Incl. U51336:Human inositol 1,3,4-trisphosphate 5/6-kinase mRNA, complete cds /cds=(118,1362) /gb=U51336 /gi=1322037 /ug=Hs.6453 /len=3049 35755_at 170.1
00170.25000 00000.12500
00170.37500 00000.12500
00170.50000 00000.12500
00170.75000 00000.25000 !
AF055026 Cluster Incl. AF055026:Homo sapiens clone 24444 RaP2 interacting protein 8 (RPIP8) mRNA, complete cds /cds=(38,1255) /gb=AF055026 /gi=3005754 /ug=Hs.6755 /len=1607 36823_at 170.7
D26362 Cluster Incl. D26362:Human mRNA for KIAA0043 gene, complete cds /cds=(139,2319) /gb=D26362 /gi=452518 /ug=Hs.86896 /len=3028 37947_at 170.7
Z22865 Cluster Incl. Z22865:H.sapiens dermatopontin mRNA, complete CDS /cds=(12,617) /gb=Z22865 /gi=311613 /ug=Hs.80552 /len=729 38058_at 170.7
00171.12500 00000.37500 !
U39317 U39317 /FEATURE= /DEFINITION=HSU39317 Human E2 ubiquitin conjugating enzyme UbcH5B (UBCH5B) mRNA, complete cds 832_at 170
AB029032 Cluster Incl. AB029032:Homo sapiens mRNA for KIAA1109 protein, partial cds /cds=(0,5873) /gb=AB029032 /gi=5689554 /ug=Hs.6606 /len=6377 36814_at 170
S85655 Cluster Incl. S85655:prohibitin [human, mRNA, 1043 nt] /cds=(50,868) /gb=S85655 /gi=246482 /ug=Hs.75323 /len=1024 36592_at 170
M35878 M35878 /FEATURE=expanded_cds /DEFINITION=HUMIBP3 Human insulin-like growth factor-binding protein-3 gene, complete cds, clone HL1006d 1586_at 170
00171.25000 00000.12500
00171.50000 00000.25000 !
U54559 Cluster Incl. U54559:Homo sapiens translation initiation factor eIF3 p40 subunit mRNA, complete cds /cds=(5,1063) /gb=U54559 /gi=2351379 /ug=Hs.58189 /len=1223 35327_at 171.5
00171.62500 00000.12500
00171.75000 00000.12500
00171.87500 00000.12500
00172.12500 00000.25000 !
AI762547 Cluster Incl. AI762547:wh92e05.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2388224 /clone_end=3 /gb=AI762547 /gi=5178214 /ug=Hs.75206 /len=655 32540_at 172.1
00172.25000 00000.12500
00172.37500 00000.12500
00172.62500 00000.25000 !
U11313 Cluster Incl. U11313:Human sterol carrier protein-X/sterol carrier protein-2 (SCP-X/SCP-2) gene, promoter and /cds=(121,1764) /gb=U11313 /gi=1773238 /ug=Hs.75760 /len=2678 36688_at 172.6
AF051946 Cluster Incl. AF051946:Homo sapiens T-type calcium channel alpha-1 subunit mRNA, complete cds /cds=(77,6211) /gb=AF051946 /gi=3779233 /ug=Hs.122359 /len=7761 37529_at 172.6
HG1996-HT2044 Guanine Nucleotide-Binding Protein Rap2, Ras-Oncogene Related 1820_g_at 172.6
00172.87500 00000.25000 !
X87949 Cluster Incl. X87949:H.sapiens mRNA for BiP protein /cds=(222,2183) /gb=X87949 /gi=1143491 /ug=Hs.75410 /len=2537 36614_at 172.8
00173.12500 00000.25000 !
00173.25000 00000.12500
00173.50000 00000.25000 !
AJ224442 Cluster Incl. AJ224442:Homo sapiens mRNA for putative methyltransferase /cds=(17,679) /gb=AJ224442 /gi=2911586 /ug=Hs.155020 /len=1795 40089_at 173.6
00173.75000 00000.25000 !
M62302 M62302 /FEATURE= /DEFINITION=HUMGDF1 Human growth/differentiation factor 1 (GDF-1) mRNA, complete cds 887_at 173.7
AF044968 Cluster Incl. AF044968:untitled /cds=(0,1351) /gb=AF044968 /gi=3941380 /ug=Hs.183986 /len=1352 32156_at 173.8
00174.12500 00000.37500 !
AL008726 Cluster Incl. AL008726:dJ337O18.2 (Lysosomal Protective Protein precursor (EC 3.4.16.5, Cathepsin A, Carboxypeptidase C)) /cds=(133,1575) /gb=AL008726 /gi=3183870 /ug=Hs.118126 /len=1946 39062_at 174
N29665 Cluster Incl. N29665:yw73e06.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-257890 /clone_end=3 /gb=N29665 /gi=1148185 /ug=Hs.226223 /len=585 41258_at 174.2
00174.25000 00000.12500
00174.37500 00000.12500
00174.50000 00000.12500
00174.75000 00000.25000 !
U63127 Cluster Incl. U63127:Human SEC7 homolog Tic (TIC) mRNA, complete cds /cds=(63,3233) /gb=U63127 /gi=4097506 /ug=Hs.110121 /len=4738 41443_at 174.7
00174.87500 00000.12500
00175.12500 00000.25000 !
AF000573 Cluster Incl. AF000573:Homo sapiens homogentisate 1,2-dioxygenase gene, complete cds /cds=(167,1504) /gb=AF000573 /gi=2130646 /ug=Hs.15113 /len=1715 31844_at 175.1
AF015308 Cluster Incl. AF015308:Homo sapiens nucleolar protein (MSP58) mRNA, complete cds /cds=(116,1504) /gb=AF015308 /gi=2384716 /ug=Hs.25313 /len=1844 33898_at 175.1
00175.37500 00000.25000 !
AF054175 Cluster Incl. AF054175:Homo sapiens mitochondrial proteolipid 68MP homolog mRNA, nuclear gene encoding mitochondrial protein, complete cds /cds=(60,236) /gb=AF054175 /gi=3341993 /ug=Hs.109052 /len=613 38967_at 175.3
00175.50000 00000.12500
00175.62500 00000.12500
00176.12500 00000.50000 !
D78586 Cluster Incl. D78586:Human CAD mRNA for multifunctional protein CAD, complete cds /cds=(26,6703) /gb=D78586 /gi=1228048 /ug=Hs.154868 /len=6972 32031_at 176
AF012434 Cluster Incl. AF012434:untitled /cds=(38,394) /gb=AF012434 /gi=2352914 /ug=Hs.186570 /len=573 33689_s_at 176
(5)!00830 00175.12500 00000.25000
(6)!00851 00179.75000 00000.37500
00179.87500 00000.12500
00180.25000 00000.37500 !
AA206524 Cluster Incl. AA206524:zq58b03.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-645773 /clone_end=5 /gb=AA206524 /gi=1801905 /ug=Hs.9552 /len=848 33198_at 180.2
00180.37500 00000.12500
00180.75000 00000.37500 !
AB001451 Cluster Incl. AB001451:Homo sapiens mRNA for Sck, partial cds /cds=(0,1622) /gb=AB001451 /gi=3080543 /ug=Hs.30965 /len=2358 35622_at 180.7
00180.87500 00000.12500
00181.12500 00000.25000 !
AJ000534 Cluster Incl. AJ000534:Homo sapiens mRNA for epsilon-sarcoglycan /cds=(68,1381) /gb=AJ000534 /gi=2969925 /ug=Hs.110708 /len=1658 41449_at 181.1
00181.25000 00000.12500
00181.37500 00000.12500
00181.75000 00000.37500 !
U65092 Cluster Incl. U65092:Human melanocyte-specific gene 1 (msg1) mRNA, complete cds /cds=(195,776) /gb=U65092 /gi=1853996 /ug=Hs.40403 /len=853 35976_at 181.7
00182.12500 00000.37500 !
AB012293 Cluster Incl. AB012293:Homo sapiens LY6H mRNA, complete cds /cds=(146,568) /gb=AB012293 /gi=3821798 /ug=Hs.159590 /len=902 36394_at 182
D87442 Cluster Incl. D87442:Human mRNA for KIAA0253 gene, partial cds /cds=(0,2127) /gb=D87442 /gi=1665772 /ug=Hs.4788 /len=2805 34835_at 182
00182.25000 00000.12500
00182.50000 00000.25000 !
L14754 Cluster Incl. L14754:Human DNA-binding protein (SMBP2) mRNA, complete cds /cds=(49,3030) /gb=L14754 /gi=401775 /ug=Hs.1521 /len=3892 31861_at 182.5
00182.75000 00000.25000 !
AB029023 Cluster Incl. AB029023:Homo sapiens mRNA for KIAA1100 protein, complete cds /cds=(410,1708) /gb=AB029023 /gi=5689536 /ug=Hs.179946 /len=4023 41179_at 182.8
X55503 Cluster Incl. X55503:H.sapiens pseudogene for metallothionein and AG/CT repetitive element /cds=(0,157) /gb=X55503 /gi=38328 /ug=Hs.194762 /len=503 31975_at 182.8
D87438 Cluster Incl. D87438:Human mRNA for KIAA0251 gene, partial cds /cds=(0,2463) /gb=D87438 /gi=2055294 /ug=Hs.170218 /len=3875 40765_at 182.8
AF015926 Cluster Incl. AF015926:Homo sapiens ezrin-radixin-moesin binding phosphoprotein-50 mRNA, complete cds /cds=(212,1288) /gb=AF015926 /gi=3220018 /ug=Hs.184276 /len=1984 32174_at 182.8
00183.00000 00000.25000 !
AL022314 Cluster Incl. AL022314:dJ1170K4.2 (novel Trypsin family protein with class A LDL receptor domains) /cds=(0,853) /gb=AL022314 /gi=4090209 /ug=Hs.194750 /len=1463 34067_at 182.9
00183.12500 00000.12500
00183.25000 00000.12500
00183.37500 00000.12500
00183.62500 00000.25000 !
U01147 Cluster Incl. U01147:Human guanine nucleotide regulatory protein (ABR) mRNA, complete cds /cds=(110,2689) /gb=U01147 /gi=393094 /ug=Hs.118021 /len=5242 39058_at 183.6
00183.75000 00000.12500
00183.87500 00000.12500
00184.12500 00000.25000 !
Y08387 Cluster Incl. Y08387:H.sapiens mRNA for mu-ARP2 protein /cds=(54,1415) /gb=Y08387 /gi=1929346 /ug=Hs.194703 /len=1713 33732_at 184
00184.25000 00000.12500
00184.62500 00000.37500 !
L25081 L25081 /FEATURE= /DEFINITION=HUMRHOCA Homo sapiens GTPase (rhoC) mRNA, complete cds 1395_at 184.6
M36341 Cluster Incl. M36341:Human ADP-ribosylation factor 4 (ARF4) mRNA, complete cds /cds=(129,671) /gb=M36341 /gi=178984 /ug=Hs.75290 /len=1513 36585_at 184.6
AB006202 Cluster Incl. AB006202:Homo sapiens mRNA for cytochrome b small subunit of complex II, complete cds /cds=(11,490) /gb=AB006202 /gi=2351036 /ug=Hs.168289 /len=1313 40467_at 184.6
00184.75000 00000.12500
00185.00000 00000.25000 !
AA932443 Cluster Incl. AA932443:oo75b11.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1571997 /clone_end=3 /gb=AA932443 /gi=3087224 /ug=Hs.118556 /len=475 41624_r_at 185
00185.12500 00000.12500
00185.37500 00000.25000 !
00185.50000 00000.12500 !
00185.62500 00000.12500
00185.87500 00000.25000 !
AA932443 Cluster Incl. AA932443:oo75b11.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1571997 /clone_end=3 /gb=AA932443 /gi=3087224 /ug=Hs.118556 /len=475 41624_r_at 185
M83738 M83738 /FEATURE= /DEFINITION=HUMPTPSA Human protein-tyrosine phosphatase (PTPase MEG2) mRNA, complete cds 1386_at 186
00186.25000 00000.37500 !
AA648295 Cluster Incl. AA648295:ns20e08.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-1184198 /clone_end=3 /gb=AA648295 /gi=2574724 /ug=Hs.8123 /len=723 38084_at 186.3
L05424 L05424 /FEATURE=cds#1 /DEFINITION=HUMSCG19 Human cell surface glycoprotein CD44 (CD44) gene, 3 end of long tailed isoform 1125_s_at 186.3
U48705 U48705 /FEATURE=mRNA /DEFINITION=HSU48705 Human receptor tyrosine kinase DDR gene, complete cds 1007_s_at 186.3
00186.37500 00000.12500
00186.75000 00000.37500 !
L08666 Cluster Incl. L08666:Homo sapiens porin (por) mRNA, complete cds and truncated cds /cds=UNKNOWN /gb=L08666 /gi=190199 /ug=Hs.78902 /len=1464 37697_s_at 186.6
X71129 Cluster Incl. X71129:H.sapiens mRNA for electron transfer flavoprotein beta subunit /cds=(27,794) /gb=X71129 /gi=297901 /ug=Hs.74047 /len=835 36881_at 186.6
U84011 Cluster Incl. U84011:Human glycogen debranching enzyme isoform 6 (AGL) mRNA, alternatively spliced isoform, complete cds /cds=(259,4809) /gb=U84011 /gi=1857627 /ug=Hs.904 /len=7178 38253_at 186.9
00186.87500 00000.12500
00187.25000 00000.37500 !
AF042081 Cluster Incl. AF042081:Homo sapiens SH3 domain binding glutamic acid-rich-like protein (SH3BGRL) mRNA, complete cds /cds=(78,422) /gb=AF042081 /gi=3337419 /ug=Hs.14368 /len=1737 39714_at 187.2
U36764 U36764 /FEATURE= /DEFINITION=HSU36764 Human TGF-beta receptor interacting protein 1 mRNA, complete cds 1644_at 187.3
00187.37500 00000.12500
00187.50000 00000.12500
00187.62500 00000.12500
00187.87500 00000.25000 !
AI057607 Cluster Incl. AI057607:oy31e07.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-1667460 /clone_end=3 /gb=AI057607 /gi=3331473 /ug=Hs.7731 /len=644 37316_r_at 187.8
00188.00000 00000.12500
00188.25000 00000.25000 !
M58286 M58286 /FEATURE= /DEFINITION=HUMTNFRB Homo sapiens tumor necrosis factor receptor mRNA, complete cds 1563_s_at 188.3
Y13247 Cluster Incl. Y13247:Homo sapiens fb19 mRNA /cds=(539,3361) /gb=Y13247 /gi=2117158 /ug=Hs.106019 /len=4506 38672_at 188.3
00188.37500 00000.12500
00188.75000 00000.37500 !
X56681 Cluster Incl. X56681:Human junD mRNA /cds=(174,1217) /gb=X56681 /gi=34018 /ug=Hs.2780 /len=1891 41484_r_at 188.8
00188.87500 00000.12500
00189.25000 00000.37500 !
L13738 Cluster Incl. L13738:Human activated p21cdc42Hs kinase (ack) mRNA, complete cds /cds=(450,3725) /gb=L13738 /gi=307304 /ug=Hs.153937 /len=4545 40235_at 189.2
00189.37500 00000.12500
00189.50000 00000.12500
00189.75000 00000.25000 !
M92287 M92287 /FEATURE= /DEFINITION=HUMCYCD3A Homo sapiens cyclin D3 (CCND3) mRNA, complete cds 1795_g_at 189.7
00190.12500 00000.37500 !
AB002332 Cluster Incl. AB002332:Human mRNA for KIAA0334 gene, complete cds /cds=(251,2791) /gb=AB002332 /gi=2224608 /ug=Hs.50722 /len=5715 36080_at 190.1
00190.25000 00000.12500
00190.50000 00000.25000 !
Z84718 Z84718 /FEATURE=cds#5 /DEFINITION=HS322B1 Human DNA sequence from clone 322B1 on chromosome 22q11-12, complete sequence [Homo sapiens] 374_f_at 190.4
AF022375 Cluster Incl. AF022375:Homo sapiens vascular endothelial growth factor mRNA, complete cds /cds=(701,1276) /gb=AF022375 /gi=3719220 /ug=Hs.73793 /len=3154 36100_at 190.6
00190.62500 00000.12500
00190.75000 00000.12500
00190.87500 00000.12500
00191.12500 00000.25000 !
U64520 Cluster Incl. U64520:Human synaptobrevin-3 mRNA, complete cds /cds=(24,326) /gb=U64520 /gi=1480967 /ug=Hs.66708 /len=693 35784_at 191.1
Z30643 Cluster Incl. Z30643:H.sapiens mRNA for chloride channel (putative) 2139bp /cds=(22,2085) /gb=Z30643 /gi=521071 /ug=Hs.123123 /len=2139 32988_at 191.1
00191.25000 00000.12500
00191.62500 00000.37500 !
AF022375 Cluster Incl. AF022375:Homo sapiens vascular endothelial growth factor mRNA, complete cds /cds=(701,1276) /gb=AF022375 /gi=3719220 /ug=Hs.73793 /len=3154 36100_at 190.6
00192.12500 00000.50000 !
S67070 S67070 /FEATURE= /DEFINITION=S67070 heat shock protein HSP72 homolog [human, thyroid associated ophthalmopathy patient, mRNA Partial, 450 nt] 541_g_at 192.1
00192.37500 00000.25000 !
M88163 Cluster Incl. M88163:Human global transcription activator homologous sequence mRNA, complete cds /cds=(141,3071) /gb=M88163 /gi=292495 /ug=Hs.152292 /len=3624 40213_at 192.2
H16917 Cluster Incl. H16917:ym39e02.r1 Homo sapiens cDNA, 5 end /clone=IMAGE-50466 /clone_end=5 /gb=H16917 /gi=883157 /ug=Hs.124699 /len=482 39879_s_at 192.2
00192.50000 00000.12500
00192.62500 00000.12500
00192.75000 00000.12500
00193.00000 00000.25000 !
D88435 Cluster Incl. D88435:Homo sapiens mRNA for HsGAK, complete cds /cds=(0,3935) /gb=D88435 /gi=2506079 /ug=Hs.153227 /len=4331 40225_at 193
00193.25000 00000.25000 !
D38305 Cluster Incl. D38305:Human mRNA for Tob, complete cds /cds=(43,1080) /gb=D38305 /gi=1580723 /ug=Hs.178137 /len=1206 40631_at 193.3
00193.62500 00000.37500 !
M69023 Cluster Incl. M69023:Human globin gene /cds=UNKNOWN /gb=M69023 /gi=183127 /ug=Hs.100090 /len=1119 38612_at 193.6
00193.75000 00000.12500
00194.25000 00000.50000 !
X59417 Cluster Incl. X59417:H.sapiens PROS-27 mRNA /cds=(62,802) /gb=X59417 /gi=35681 /ug=Hs.74077 /len=964 36122_at 193.9
AI800578 Cluster Incl. AI800578:wg12b07.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2364853 /clone_end=3 /gb=AI800578 /gi=5366138 /ug=Hs.239474 /len=598 34728_g_at 194.5
00194.50000 00000.25000 !
AI800578 Cluster Incl. AI800578:wg12b07.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2364853 /clone_end=3 /gb=AI800578 /gi=5366138 /ug=Hs.239474 /len=598 34728_g_at 194.5
D00763 D00763 /FEATURE= /DEFINITION=HUMPSC9 Human mRNA for proteasome subunit HC9 1450_g_at 194.5
00194.62500 00000.12500
00194.75000 00000.12500
00195.12500 00000.37500 !
AF038966 Cluster Incl. AF038966:Homo sapiens secretory carrier-associated membrane protein (SCAMP) mRNA, complete cds /cds=(90,1106) /gb=AF038966 /gi=2791681 /ug=Hs.184543 /len=1926 38849_at 195.1
M88108 Cluster Incl. M88108:Human p62 mRNA, complete cds /cds=(106,1437) /gb=M88108 /gi=189499 /ug=Hs.119537 /len=2685 39346_at 195.1
00195.25000 00000.12500
00195.50000 00000.25000 !
X95073 Cluster Incl. X95073:H.sapiens mRNA for translin associated protein X /cds=(160,1032) /gb=X95073 /gi=2879814 /ug=Hs.96247 /len=2649 41051_at 195.5
00195.75000 00000.25000 !
D13892 Cluster Incl. D13892:Human mRNA for carboxyl methyltransferase, complete cds /cds=(150,836) /gb=D13892 /gi=474983 /ug=Hs.79137 /len=1620 37736_at 195.8
00195.87500 00000.12500
00196.12500 00000.25000 !
L20316 Cluster Incl. L20316:Human glucagon receptor mRNA, complete cds /cds=(277,1710) /gb=L20316 /gi=405189 /ug=Hs.208 /len=2034 32886_at 196.1
S80864 Cluster Incl. S80864:cytochrome c-like polypeptide [human, lung adenocarcinoma A549, mRNA, 1041 nt] /cds=(321,893) /gb=S80864 /gi=1911547 /ug=Hs.225890 /len=1002 35955_at 196.1
AJ012755 Cluster Incl. AJ012755:Homo sapiens mRNA for TL132 /cds=(1241,2305) /gb=AJ012755 /gi=4128038 /ug=Hs.234573 /len=4328 34677_f_at 196.1
00196.25000 00000.12500
00196.50000 00000.25000 !
L00693 Cluster Incl. L00693:Human carcinoembryonic antigen (CGM1) mRNA, complete cds /cds=(54,692) /gb=L00693 /gi=180228 /ug=Hs.11 /len=1022 32469_at 196.4
U06863 Cluster Incl. U06863:Human follistatin-related protein precursor mRNA, complete cds /cds=(91,1017) /gb=U06863 /gi=536897 /ug=Hs.155712 /len=1987 40130_at 196.6
00197.12500 00000.62500 !
D83779 Cluster Incl. D83779:Human mRNA for KIAA0195 gene, complete cds /cds=(203,4273) /gb=D83779 /gi=1228040 /ug=Hs.80540 /len=5022 38056_at 197.1
00197.25000 00000.12500
00197.50000 00000.25000 !
AC004472 Cluster Incl. AC004472:Homo sapiens chromosome 9, P1 clone 11659 /cds=(0,2420) /gb=AC004472 /gi=2984582 /ug=Hs.234463 /len=2421 33818_at 197.4
AJ236876 Cluster Incl. AJ236876:Homo sapiens mRNA for poly(ADP-ribose) polymerase-2 /cds=(86,1690) /gb=AJ236876 /gi=5457336 /ug=Hs.24284 /len=1797 34755_at 197.6
00197.75000 00000.25000 !
U22431 U22431 /FEATURE= /DEFINITION=HSU22431 Human hypoxia-inducible factor 1 alpha (HIF-1 alpha) mRNA, complete cds 1039_s_at 197.8
00197.87500 00000.12500
00198.25000 00000.37500 !
AI796944 Cluster Incl. AI796944:we25b03.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2342093 /clone_end=3 /gb=AI796944 /gi=5362416 /ug=Hs.15299 /len=547 40219_at 198.1
W27949 Cluster Incl. W27949:39h3 Homo sapiens cDNA /gb=W27949 /gi=1307897 /ug=Hs.111029 /len=735 41454_at 198.1
U26266 Cluster Incl. U26266:Human deoxyhypusine synthase mRNA, complete cds /cds=(5,970) /gb=U26266 /gi=1373016 /ug=Hs.79064 /len=1087 37722_s_at 198.3
00198.50000 00000.25000 !
W28504 Cluster Incl. W28504:48e7 Homo sapiens cDNA /gb=W28504 /gi=1308515 /ug=Hs.154085 /len=1007 36338_at 198.5
00198.62500 00000.12500
00198.75000 00000.12500
00198.87500 00000.12500
00199.00000 00000.12500
00199.25000 00000.25000 !
X94232 Cluster Incl. X94232:H.sapiens mRNA for novel T-cell activation protein /cds=(140,1123) /gb=X94232 /gi=1292867 /ug=Hs.78335 /len=2606 37406_at 199.1
AB029037 Cluster Incl. AB029037:Homo sapiens mRNA for KIAA1114 protein, complete cds /cds=(183,4346) /gb=AB029037 /gi=5689564 /ug=Hs.239492 /len=4750 34730_g_at 199.3
00199.50000 00000.25000 !
00199.62500 00000.12500
00199.87500 00000.25000 !
00200.12500 00000.25000 !
00200.37500 00000.25000 !
00200.50000 00000.12500
00200.75000 00000.25000 !
U67122 U67122 /FEATURE= /DEFINITION=HSU67122 Human ubiquitin-related protein SUMO-1 mRNA, complete cds 457_s_at 200.2
00201.12500 00000.37500 !
W28734 Cluster Incl. W28734:51a1 Homo sapiens cDNA /gb=W28734 /gi=1308682 /ug=Hs.20472 /len=671 32823_at 201.3
00201.25000 00000.12500
00201.37500 00000.12500
00201.50000 00000.12500
00201.62500 00000.12500
00201.87500 00000.25000 !
D13988 D13988 /FEATURE= /DEFINITION=HUMRABGDI Human rab GDI mRNA, complete cds 777_at 201.7
00202.12500 00000.25000 !
00202.50000 00000.37500 !
AB015019 Cluster Incl. AB015019:Homo sapiens mRNA for BAP2-alpha protein, complete cds /cds=(93,1658) /gb=AB015019 /gi=4126474 /ug=Hs.7936 /len=3168 37760_at 202.5
00202.62500 00000.12500
00202.75000 00000.12500
00203.00000 00000.25000 !
U29171 U29171 /FEATURE= /DEFINITION=HSU29171 Human casein kinase I delta mRNA, complete cds 493_at 203
00203.12500 00000.12500
00203.50000 00000.37500 !
N25429 Cluster Incl. N25429:yx76b02.s1 Homo sapiens cDNA, 3 end /clone=IMAGE-267627 /clone_end=3 /gb=N25429 /gi=1139870 /ug=Hs.32317 /len=611 41525_at 203.6
00203.62500 00000.12500
00203.75000 00000.12500
(6)!00963 00203.75000 00000.12500
Entrez Gene References
(7)!00964 00204.00000 00000.25000
00204.37500 00000.37500 !
U91543 Cluster Incl. U91543:Homo sapiens zinc-finger helicase (hZFH) mRNA, complete cds /cds=(150,6152) /gb=U91543 /gi=3298561 /ug=Hs.237761 /len=6771 34707_at 204.3
S71043 Cluster Incl. S71043:Ig alpha 2=immunoglobulin A heavy chain allotype 2 {constant region, germ line} [human, peripheral blood neutrophils, Genomic, 1799 nt] /cds=(0,1022) /gb=S71043 /gi=546798 /ug=Hs.32225 /len=1047 33500_i_at 204.3
00204.50000 00000.12500
00204.75000 00000.25000 !
J05249 J05249 /FEATURE= /DEFINITION=HUMREPA Human replication protein A 32-kDa subunit mRNA, complete cds 1119_at 204
00204.87500 00000.12500
00205.12500 00000.25000 !
U18009 Cluster Incl. U18009:Human chromosome 17q21 mRNA clone LF113 /cds=(0,939) /gb=U18009 /gi=602277 /ug=Hs.157236 /len=2381 40147_at 205.1
00205.25000 00000.12500
00205.37500 00000.12500
00205.62500 00000.25000 !
J03826 Cluster Incl. J03826:Human adrenodoxin reductase mRNA, complete cds /cds=(20,1513) /gb=J03826 /gi=178212 /ug=Hs.69745 /len=1830 40336_at 205.7
U33052 U33052 /FEATURE= /DEFINITION=HSU33052 Human lipid-activated, protein kinase PRK2 mRNA, complete cds 199_s_at 205.7
00205.75000 00000.12500
00206.00000 00000.25000 !
AB007936 Cluster Incl. AB007936:Homo sapiens mRNA for KIAA0467 protein, partial cds /cds=(0,6167) /gb=AB007936 /gi=3413895 /ug=Hs.11147 /len=6216 41458_at 206.1
00206.12500 00000.12500
00206.37500 00000.25000 !
AI741833 Cluster Incl. AI741833:wg29e04.x1 Homo sapiens cDNA, 3 end /clone=IMAGE-2366526 /clone_end=3 /gb=AI741833 /gi=5110121 /ug=Hs.8991 /len=658 38798_s_at 206.2
AL034374 Cluster Incl. AL034374:Human DNA sequence from clone 483K16 on chromosome 6p12.1-21.1. Contains (parts of) two novel genes, 40S Ribosomal protein S16 and 60S Ribosomal protein L31 pseudogenes, ESTs, STSs, GSSs and a putative CpG island /cds=(0,70333821_at034374 /gi=4455565 /ug=Hs.234555 /len=2432 33821_at034374 /gi=4455565 /ug=Hs.234555 /len=2432 206.5
00206.50000 00000.12500
00206.62500 00000.12500
00206.75000 00000.12500
00207.00000 00000.25000 !
U58970 Cluster Incl. U58970:Human putative outer mitochondrial membrane 34 kDa translocase hTOM34 mRNA, complete cds /cds=(31,960) /gb=U58970 /gi=1399812 /ug=Hs.76927 /len=1849 37049_g_at 206.9
U24183 Cluster Incl. U24183:Human phosphofructokinase (PFKM) mRNA, complete cds /cds=(1273,2670) /gb=U24183 /gi=975289 /ug=Hs.75160 /len=3067 36196_at 207.1
00207.25000 00000.25000 !
AF067420 Cluster Incl. AF067420:Homo sapiens SNC73 protein (SNC73) mRNA, complete cds /cds=(395,1549) /gb=AF067420 /gi=3201899 /ug=Hs.32225 /len=1594 33499_s_at 207.2
S75463 Cluster Incl. S75463:P43=mitochondrial elongation factor homolog [human, liver, mRNA, 1644 nt] /cds=(91,1449) /gb=S75463 /gi=833998 /ug=Hs.12084 /len=1644 39867_at 207.3
00207.37500 00000.12500
00207.62500 00000.25000 !
X96484 Cluster Incl. X96484:H.sapiens mRNA for DGCR6 protein /cds=(422,676) /gb=X96484 /gi=1223740 /ug=Hs.153910 /len=1080 40234_at 207.4
W28931 Cluster Incl. W28931:56f3 Homo sapiens cDNA /gb=W28931 /gi=1309086 /ug=Hs.83709 /len=886 38449_at 207.8
00207.75000 00000.12500
00207.87500 00000.12500
00208.12500 00000.25000 !
AF099149 Cluster Incl. AF099149:Homo sapiens TRIAD1 type I mRNA, complete cds /cds=(144,1625) /gb=AF099149 /gi=3930775 /ug=Hs.9899 /len=3892 39164_at 207.8
M16342 Cluster Incl. M16342:Human nuclear ribonucleoprotein particle (hnRNP) C protein mRNA, complete cds /cds=UNKNOWN /gb=M16342 /gi=184266 /ug=Hs.182447 /len=1666 33666_at 208.6
00208.50000 00000.37500 !
M16342 Cluster Incl. M16342:Human nuclear ribonucleoprotein particle (hnRNP) C protein mRNA, complete cds /cds=UNKNOWN /gb=M16342 /gi=184266 /ug=Hs.182447 /len=1666 33666_at 208.6
00208.62500 00000.12500
00208.75000 00000.12500
00209.12500 00000.37500 !
AF086947 Cluster Incl. AF086947:untitled /cds=(334,4119) /gb=AF086947 /gi=4139120 /ug=Hs.74617 /len=4464 36158_at 209.2
(7)!00990 00209.12500 00000.37500
Number(s) sequence derivation based on low enthropy (redundant) number groups (mmd_C.cpp) mmd_C.ZIP is based on 2-byte CEL mean column number values used as 4x4(bit) integer array indexes, were actual array values are index occurence counts . Array entries are sorted in an descending order and their descending 4x4(bit) indexes populate a combinations array holding as much as 4(entries) for a 4(bit) index sequence. Permuting each entry would produce a max of 4*4*4*4 number combinations. Each CEL mean column number value was compared vs each combination entry (that also holds a occurence count) and x6 number sequence vector was produced having (occurence) sums of all 6 matching factor combination entries. Thus, a sequence chart was produced, were high Y axis (linear) regions suggest sequences composed of number (combinations) having high occurence counts.
In mm5751d.cpp each mesured value was (not) index (ed) - range (vs previous indexed value) into xd.txt concerning comparisson of SUM of all equal single factor index entries (from the number serie) divided by (actual) index number value to 2*n poweres , or mmd57531.cpp loge of SUM of all equal single factor index entries .
Ommition of values and substraction of index with previos index value produces the xd.txt right (range) column .
The derived numeric order as computed by the measured (mean column) values series by mm57531d.cpp and alike mm5751d.cpp from mm57.zip ( at 17.12.2009 v2.2.0 ) , perform nonlinear number groupings similar to those mentioned in the cited Abstract from the article from Discrete Applied Mathematics 155 (2007) 831 – 839 entitled as Binary templates for comma-free DNA codes from Oliver D. King , Philippe Gaborit :
Abstract
Arita and Kobayashi proposed a method for constructing comma-free DNA codes using binary templates, and showed that the
separation d of any such binary template of length n satisfies d>=n/2. Kobayashi, Kondo and Arita later produced an infinite family
of binary templates with d>=11n/30. Here we demonstrate the existence of an infinite family of binary templates with d>=n/2 -
(18n loge n)1/2.We also give an explicit construction for an infinite family of binary templates with d>=n/2 - 19n1/2 loge n.
© 2006 Elsevier B.V. All rights reserved.
Typical lung cancer sequences , marked by index sequences values (t_2.cpp) ,
index number group files named by column permutations , eg EEFEFG_.txt ,
and mainly consisting of index group column permutations E , F and G
choosen by number of occurences from a probeset crossection (cs_1.cpp) , and converted to charts ,
presenting more than 90% of probe scans values , from Lung cancer datasets .
(in comparisson to charts derived from Lung_normal using Y-axis index mult by 8 (previous chart value - 4) , column permutations with same symbol letters E , F and G ,
indicating the polymorphic nature of lung cancer )
Image bellow present probe set scans pt1 results .
Image bellow present probe set scans pt2 results .
Image bellow present probe set scans pt3 results .
Image bellow present probe set scans pt4 results .
Observing (upper) pictures from Gene Expression-Based Classification and Outcome Prediction of Central Nervous Embryonal Tumors
vertical group index (band) intersection matches would state that
decription of this dataset probes could be provided by listing (most specific) group elements vs their count. Image below (scans pt 4 - pt 1) displays chart images of such .
ALL normal sequences (N01_normal - N25_normal ) from prostate cancer datasets .
ALL tumor sequences (T01_tumor - T25_tumor ) from prostate cancer datasets .
Results from T21_tumor.CEL (Prostate cancer datasets) , (upper picture charts tumor-normal row-pair 4)
index group entries for column 4
00135.00000 00001.00000
00142.00000 00007.00000!(1)
00143.00000 00001.00000
00148.00000 00005.00000!(2)
00149.00000 00001.00000
00150.00000 00001.00000
00151.00000 00001.00000
00166.00000 00015.00000!(3)
00167.00000 00001.00000
00174.00000 00007.00000!(4)
00175.00000 00001.00000
00180.00000 00005.00000!(5)
00181.00000 00001.00000
00182.00000 00001.00000
00183.00000 00001.00000
(1)!00135.00000 00028.25000 00000.12500
00028.25000 00000.12500
00028.75000 00000.50000!
Hs.159352 gnl|UG|Hs#S1570315 Homo sapiens mRNA cDNA DKFZp434F122 (from clone DKFZp434F122) 28 P
Hs.79844 gnl|UG|Hs#S1569753 Homo sapiens mRNA cDNA DKFZp564M1416 (from clone DKFZp564M1416) 28 P
Hs.239459 gnl|UG|Hs#S472987 H.sapiens Na+-D-glucose cotransport regulator gene 31695_g_at 28 M
Hs.25283 gnl|UG|Hs#S144220 yh11b03.s1 Homo sapiens cDNA, 3' end 35140_at 28 P
Hs.135084 gnl|UG|Hs#S1243462 qy39a10.x1 Homo sapiens cDNA, 3' end 39689_at 28 P
Hs.62 gnl|UG|Hs#S1495 Human protein tyrosine phosphatase (PTP-PEST) mRNA, complete cds 1463_at 28 P
Hs.7989 gnl|UG|Hs#S1569505 Homo sapiens mRNA for KIAA1045 protein, partial cds 37566_at 28 P
Hs.78869 gnl|UG|Hs#S3375 Human transcription elongation factor (SII) mRNA, complete cds 1073_at 28 P
Hs.55220 gnl|UG|Hs#S1569815 Homo sapiens mRNA cDNA DKFZp586C021 (from clone DKFZp586C021) 28 P
Hs.152931 gnl|UG|Hs#S2780 Human lamin B receptor (LBR) mRNA, complete cds 288_s_at 28 P
Hs.194754 gnl|UG|Hs#S1570121 Homo sapiens DNA sequence from PAC 434O14 on chromosome 1q32.3.-41. Contains the HSD11B1 gene for Hydroxysteroid (11-beta) Dehydrogenase 1, the ADORA2BP adenosine A2b receptor LIKE pseudogene, the IRF6 gene for Interferon Regulatory Fac 40721_g_at 28 P
Hs.91797 gnl|UG|Hs#S554062 RBP1=retinoblastoma binding protein 1 [human, Nalm-6 pre-B cell leukemia, mRNA, 4834 nt] 1784_s_at 28 P
Hs.3642 gnl|UG|Hs#S1569759 Homo sapiens mRNA cDNA DKFZp564B163 (from clone DKFZp564B163) 28 P
Hs.18593 gnl|UG|Hs#S952776 Homo sapiens mRNA from chromosome 5q31-33 region 40922_at 28 P
Hs.180324 gnl|UG|Hs#S572310 Human YY1-associated factor 2 (YAF2) mRNA, complete cds 38573_at 28 P
AFFX-HUMRGE/M10098_M_at (endogenous control) AFFX-HUMRGE/M10098_M_at 28 P
00028.87500 00000.12500
00029.00000 00000.12500
00029.12500 00000.12500
00029.50000 00000.37500!
Hs.169250 gnl|UG|Hs#S268821 Homo sapiens thymosin beta-10 gene, 3'end 31481_s_at 29 P
Hs.81170 gnl|UG|Hs#S1225272 qq95e10.x1 Homo sapiens cDNA, 3' end 40059_r_at 29 P
Hs.155751 gnl|UG|Hs#S1090883 Homo sapiens F1Fo-ATPase synthase f subunit mRNA, complete cds 40134_at 29 P
Hs.8383 gnl|UG|Hs#S1570293 Homo sapiens mRNA cDNA DKFZp434H071 (from clone DKFZp434H071) 29 P
Hs.84318 gnl|UG|Hs#S1534 Human replication protein A 70kDa subunit mRNA complete cds 38481_at 29 P
Hs.82173 gnl|UG|Hs#S554322 EGR alpha=early growth response gene alpha [human, prostate, mRNA, 3228 nt] 224_at 29 P
Hs.103998 gnl|UG|Hs#S554084 GABRB2=gamma-aminobutyric acid A receptor beta 2 subunit [human, cerebellum, mRNA, 1860 nt] 32460_at 29 M
Hs.78890 gnl|UG|Hs#S5957 Homo sapiens (clone S171) mRNA, complete cds 37693_at 29 M
Hs.13493 gnl|UG|Hs#S1569799 Homo sapiens mRNA cDNA DKFZp586H2219 (from clone DKFZp586H2219) 29 P
00029.62500 00000.12500
00029.75000 00000.12500
(1)!00142.00000 00029.75000 00000.12500
(2)!00143.00000 00030.12500 00000.37500
00030.12500 00000.37500!
Hs.76362 gnl|UG|Hs#S1174653 qf76b12.x1 Homo sapiens cDNA, 3' end 37010_at 30 P
Hs.106909 gnl|UG|Hs#S1569772 Homo sapiens mRNA cDNA DKFZp566D193 (from clone DKFZp566D193) 30 P
Hs.75879 gnl|UG|Hs#S5375 H.sapiens mRNA for ribosomal protein L19 32435_at 30 P
Hs.878 gnl|UG|Hs#S270141 Human (clone P1-5) L-iditol-2 dehydrogenase gene 38763_at 30 P
Hs.75887 gnl|UG|Hs#S269992 Homo sapiens coatomer protein (COPA) mRNA, complete cds 36962_at 30 P
Hs.76362 gnl|UG|Hs#S1174653 qf76b12.x1 Homo sapiens cDNA, 3' end 37010_at 30 P
Hs.106909 gnl|UG|Hs#S1569772 Homo sapiens mRNA cDNA DKFZp566D193 (from clone DKFZp566D193) 30 P
Hs.75879 gnl|UG|Hs#S5375 H.sapiens mRNA for ribosomal protein L19 32435_at 30 P
Hs.878 gnl|UG|Hs#S270141 Human (clone P1-5) L-iditol-2 dehydrogenase gene 38763_at 30 P
Hs.75887 gnl|UG|Hs#S269992 Homo sapiens coatomer protein (COPA) mRNA, complete cds 36962_at 30 P
00030.37500 00000.25000!
00030.50000 00000.12500
00030.62500 00000.12500
00030.75000 00000.12500
00030.87500 00000.12500
(2)!00148.00000 00030.87500 00000.12500
(3)!00151.00000 00031.50000 00000.12500
00031.75000 00000.25000!
Hs.6856 gnl|UG|Hs#S1367752 Homo sapiens ASH2L gene, complete cds, similar to Drosophila ash2 gene 35804_at 31 P
Hs.278857 gnl|UG|Hs#S552484 Human BTK region clone ftp-3 mRNA 41132_r_at 31 P
Hs.194143 gnl|UG|Hs#S554446 Human BRCA1, Rho7 and vatI genes, complete cds, and ipf35 gene, partial cds 625_at 31 P
Hs.77637 gnl|UG|Hs#S953183 Homo sapiens PAC clone DJ0170O19 from 7p15-p21 41448_at 31 M
Hs.4316 gnl|UG|Hs#S891741 Homo sapiens CAGH32 mRNA, partial cds 34815_at 31 P
Hs.215595 gnl|UG|Hs#S552961 Human liver mRNA for beta-subunit signal transducing proteins Gs 33341_at 31 M
Hs.90078 gnl|UG|Hs#S1367691 Homo sapiens mRNA for putative Sqv-7-like protein, partial 38005_at 31 P
Hs.150675 gnl|UG|Hs#S1433666 tr08h04.x1 Homo sapiens cDNA, 3' end 39766_r_at 31 P
Hs.27076 gnl|UG|Hs#S705780 H.sapiens mRNA for phosphate cyclase 35195_at 31 P
Hs.554 gnl|UG|Hs#S780 Human SS-A 35294_at 31 P
Hs.10315 gnl|UG|Hs#S553732 Human mRNA for KIAA0245 gene, complete cds 39533_at 31 M
Hs.1244 gnl|UG|Hs#S1843 Human CD9 antigen mRNA, complete cds 39389_at 31 P
Hs.174224 gnl|UG|Hs#S452 Homo sapiens mRNA for angiotensin II type 1b receptor, complete cds 346_s_at 31 P
Hs.1666 gnl|UG|Hs#S2598 Human guanine nucleotide regulatory protein (G13) mRNA, complete cds 33635_at 31 P
Hs.24341 gnl|UG|Hs#S1569794 Homo sapiens mRNA cDNA DKFZp586I1419 (from clone DKFZp586I1419) 31 P
Entrez Gene References
00031.87500 00000.12500
00032.12500 00000.25000!
00032.37500 00000.25000!
Hs.200816 gnl|UG|Hs#S1535 Human rac protein kinase beta mRNA, complete cds 2022_at 32 P
Hs.179704 gnl|UG|Hs#S689 Human N-benzoyl-L-tyrosyl-p-amino-benzoic acid hydrolase alpha subunit (PPH alpha) mRNA, complete cds 35490_at 32 M
Hs.28853 gnl|UG|Hs#S705702 Homo sapiens mRNA for Cdc7-related kinase, complete cds 1809_at 32 P
Hs.35937 gnl|UG|Hs#S269701 H.sapiens MYF6 gene encoding a muscle determination factor 39676_at 32 P
Hs.75428 gnl|UG|Hs#S5429 Human mRNA for Cu 36620_at 32 M
Hs.17154 gnl|UG|Hs#S553803 H.sapiens mRNA for protein kinase, Dyrk4, partial 102_at 32 P
Hs.94211 gnl|UG|Hs#S554363 Homo sapiens gene for protein involved in sexual development, complete cds 723_s_at 32 P
Hs.3776 gnl|UG|Hs#S1263145 Homo sapiens zinc finger protein 216 splice variant 1 (ZNF216) mRNA, complete cds 41542_at 32 P
Hs.12393 gnl|UG|Hs#S1367756 Homo sapiens mRNA for dTDP-D-glucose 4,6-dehydratase 41667_s_at 32 P
Hs.80420 gnl|UG|Hs#S592166 Human CX3C chemokine precursor, mRNA, alternatively spliced, complete cds 823_at 32 P
Hs.27345 gnl|UG|Hs#S952751 Homo sapiens mRNA capping enzyme (HCE) mRNA, complete cds 35202_at 32 M
Hs.13493 gnl|UG|Hs#S1569799 Homo sapiens mRNA cDNA DKFZp586H2219 (from clone DKFZp586H2219) 32 P
Hs.1145 gnl|UG|Hs#S5604 Human Wilms tumor WT1 mRNA for zinc finger protein, Krueppel-like 1500_at 32 M
Hs.16081 gnl|UG|Hs#S1569975 Homo sapiens mRNA cDNA DKFZp586C1622 (from clone DKFZp586C1622) 32 P
Hs.170279 gnl|UG|Hs#S269139 Human lipoprotein-associated coagulation inhibitor (LACI) gene 40767_at 32 P
00032.62500 00000.25000!
00032.75000 00000.12500
00032.87500 00000.12500
00033.00000 00000.12500
00033.37500 00000.37500!
Hs.17639 gnl|UG|Hs#S1435510 at40e04.x1 Homo sapiens cDNA, 3' end 40623_at 33 P
Hs.75925 gnl|UG|Hs#S553667 Homo sapiens mRNA for proteasome inhibitor hPI31 subunit, complete cds 920_at 33 M
Hs.180895 gnl|UG|Hs#S1263824 Homo sapiens mRNA for KIAA0765 protein, partial cds 41211_at 33 P
Hs.259785 gnl|UG|Hs#S4013 Homo sapiens mitochondrial carnitine palmitoyltransferase I mRNA, complete cds 35229_at 33 P
Hs.5028 gnl|UG|Hs#S1570243 Homo sapiens mRNA cDNA DKFZp564O0423 (from clone DKFZp564O0423) 33 P
00033.62500 00000.25000!
00033.75000 00000.12500
00034.12500 00000.37500!
Hs.135259 gnl|UG|Hs#S1971995 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13 Contains the H1F0 gene for H1 histone family member 0, the GCAT gene for glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), the GALR3 gene for galanin r 33386_at 34 P
Hs.2265 gnl|UG|Hs#S3869 Human mRNA for polypeptide 7B2 34265_at 34 P
Hs.239298 gnl|UG|Hs#S2824 Human microtubule-associated protein 4 mRNA, complete cds 242_at 34 P
Hs.78771 gnl|UG|Hs#S5216 Human mRNA encoding phosphoglycerate kinase 37677_at 34 P
Hs.102238 gnl|UG|Hs#S875932 Homo sapiens clone FBA1 Cri-du-chat region mRNA 35059_at 34 P
Hs.81230 gnl|UG|Hs#S705470 Human small GTP-binding protein mRNA, complete cds 809_at 34 P
Hs.36927 gnl|UG|Hs#S472679 Human mRNA for KIAA0201 gene, complete cds 34398_at 34 P
Hs.24950 gnl|UG|Hs#S891699 Homo sapiens mRNA for RGS5, complete cds 33890_at 34 P
Hs.65425 gnl|UG|Hs#S1263236 Homo sapiens BAC clone 157K21 from 8q21, complete sequence 36570_at 34 P
Hs.79378 gnl|UG|Hs#S572171 Human cyclin A1 mRNA, complete cds 1914_at 34 P
Hs.13245 gnl|UG|Hs#S1244971 Homo sapiens mRNA for KIAA0455 protein, partial cds 41714_at 34 P
Hs.42674 gnl|UG|Hs#S472645 Human putative mismatch repair 1719_at 34 P
Hs.56205 gnl|UG|Hs#S876060 Homo sapiens insulin induced protein 1 (INSIG1) gene, complete cds 35303_at 34 P
Hs.167558 gnl|UG|Hs#S633 Human mRNA for DB1, complete cds 32628_at 34 P
Hs.198288 gnl|UG|Hs#S226229 Human mRNA for tyrosine phosphatase, complete cds 1658_g_at 34 M
Hs.111 gnl|UG|Hs#S134 Human mRNA for FGF-9, complete cds 35081_at 34 P
00034.37500 00000.25000!
00034.50000 00000.12500
00034.62500 00000.12500
(3)!00166.00000 00034.62500 00000.12500
(4)!00167.00000 00035.12500 00000.50000
00035.12500 00000.50000!
Hs.18705 gnl|UG|Hs#S1570576 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 417629 38856_at 35 P
Hs.23582 gnl|UG|Hs#S551936 Human gastrointestinal tumor-associated antigen GA733-1 protein gene, complete cds, clone 05516 291_s_at 35 M
Hs.131945 gnl|UG|Hs#S1569315 Homo sapiens mRNA for KIAA0940 protein, complete cds 34931_at 35 P
Hs.132898 gnl|UG|Hs#S966316 AF009767 Homo sapiens cDNA 41720_r_at 35 P
Hs.224829 gnl|UG|Hs#S513740 48d1 Homo sapiens cDNA 39491_s_at 35 P
Hs.3873 gnl|UG|Hs#S377366 Human palmitoyl protein thioesterase mRNA, complete cds 34774_at 35 P
Hs.209607 gnl|UG|Hs#S592032 Human endogenous retrovirus mRNA for ORF 38935_at 35 P
Hs.274412 gnl|UG|Hs#S334230 yy35g03.s1 Homo sapiens cDNA, 3' end 39131_at 35 P
00035.62500 00000.50000!
00035.75000 00000.12500
00035.87500 00000.12500
00036.12500 00000.25000!
Hs.89555 gnl|UG|Hs#S2273 Human hemopoietic cell protein-tyrosine kinase (HCK) gene, complete cds, clone HK24 2045_s_at 36 P
Hs.139120 gnl|UG|Hs#S592164 Human RNaseP protein p30 (RPP30) mRNA, complete cds 39702_at 36 P
Hs.9349 gnl|UG|Hs#S952761 Homo sapiens mRNA for ryanodine receptor 3, complete CDS 41028_at 36 P
Hs.184724 gnl|UG|Hs#S513804 49b3 Homo sapiens cDNA 33328_at 36 P
Hs.75765 gnl|UG|Hs#S3665 Human cytokine (GRO-beta) mRNA, complete cds 37187_at 36 P
Hs.61153 gnl|UG|Hs#S51 Human mRNA for MSS1, complete cds 35353_at 36 P
Hs.12513 gnl|UG|Hs#S1091080 Homo sapiens clone 23687 mRNA sequence 34527_r_at 36 M
Hs.170290 gnl|UG|Hs#S998766 Homo sapiens mRNA for KIAA0583 protein, partial cds 40575_at 36 P
Hs.202661 gnl|UG|Hs#S3779 Human mRNA for integrin beta 1 subunit 32808_at 36 P
Hs.75375 gnl|UG|Hs#S377210 Human mRNA for cytosolic malate dehydrogenase, complete cds 36608_at 36 P
Hs.223006 gnl|UG|Hs#S1090429 Homo sapiens chromosome 19, cosmid R31449 32914_f_at 36 M
00036.25000 00000.12500
00036.37500 00000.12500
00036.50000 00000.12500
(4)!00174.00000 00036.50000 00000.12500
(5)!00175.00000 00036.62500 00000.12500
00036.62500 00000.12500
00036.87500 00000.25000!
Hs.56247 gnl|UG|Hs#S1569427 Homo sapiens mRNA for activation-inducible lymphocyte immunomediatory molecule AILIM, complete cds 34607_at 37 M
Hs.52515 gnl|UG|Hs#S1570283 Homo sapiens mRNA cDNA DKFZp434N024 (from clone DKFZp434N024) 37 P
Hs.239720 gnl|UG|Hs#S1089673 qa49c09.x1 Homo sapiens cDNA, 3' end 33861_at 37 P
Hs.50282 gnl|UG|Hs#S553225 H.sapiens mRNA for ragB protein 39989_at 37 P
Hs.71331 gnl|UG|Hs#S511233 14c12 Homo sapiens cDNA 40348_s_at 37 P
Hs.115277 gnl|UG|Hs#S891823 Homo sapiens ubiquitous TPR motif, Y isoform (UTY) mRNA, alternative transcript 3, complete cds 34477_at 37 P
Hs.249495 gnl|UG|Hs#S4862 H.sapiens mRNA for hnRNPcore protein A1 34987_s_at 37 P
Hs.27657 gnl|UG|Hs#S1263861 Homo sapiens mRNA for KIAA0802 protein, partial cds 39614_at 37 P
Hs.166982 gnl|UG|Hs#S103 Human mRNA for PIG-F (phosphatidyl-inositol-glycan class F), complete cds 776_at 37 P
Hs.26208 gnl|UG|Hs#S2547 Homo sapiens alpha-1 type XVI collagen (COL16A1) mRNA, complete cds 35168_f_at 37 P
Hs.23585 gnl|UG|Hs#S1569538 Homo sapiens mRNA for KIAA1078 protein, partial cds 34688_at 37 P
Hs.177664 gnl|UG|Hs#S1367674 Homo sapiens mRNA for KIAA0914 protein, complete cds 41145_at 37 M
Hs.121481 gnl|UG|Hs#S417521 Human thyrotroph embryonic factor (TEF) mRNA, complete cds 32493_at 37 P
Hs.91747 gnl|UG|Hs#S185 Human profilin II mRNA, complete cds 38840_s_at 37 P
Hs.184050 gnl|UG|Hs#S341936 Human K-ras oncogene protein mRNA, complete cds 1940_at 37 P
Hs.75074 gnl|UG|Hs#S5050 H.sapiens mRNA for MAP kinase activated protein kinase 1440_s_at 37 P
Hs.155560 gnl|UG|Hs#S1192 Homo sapiens integral membrane protein, calnexin, (IP90) mRNA, complete cds 40125_at 37 P
00037.00000 00000.12500
00037.25000 00000.25000!
00037.75000 00000.50000!
Hs.1608 gnl|UG|Hs#S2489 Homo sapiens replication protein A 14kDa subunit (RPA) mRNA, complete cds 652_g_at 38 M
Hs.101047 gnl|UG|Hs#S2086 Human (HeLa) helix-loop-helix protein HE47 (E2A) mRNA, 3' end 32874_at 38 P
Hs.154679 gnl|UG|Hs#S3325 Human synaptotagmin mRNA, complete cds 40075_at 38 P
Hs.12484 gnl|UG|Hs#S554479 Human clone 23826 mRNA sequence 41676_at 38 P
Hs.250692 gnl|UG|Hs#S2291 Human hepatic leukemia factor (HLF) mRNA, complete cds 38627_at 38 M
Hs.179825 gnl|UG|Hs#S816536 Homo sapiens Ran binding protein 2 (RanBP2alpha) mRNA, partial cds 41174_at 38 P
Hs.12797 gnl|UG|Hs#S334385 yy39g07.s1 Homo sapiens cDNA, 3' end 39897_at 38 P
Hs.10712 gnl|UG|Hs#S592298 Human mutated in multiple advanced cancers protein (MMAC1) mRNA, complete cds 39552_at 38 P
Hs.173824 gnl|UG|Hs#S417467 Human G 40865_at 38 P
00037.87500 00000.12500
(5)!00180.00000 00037.87500 00000.12500
Results from T21_tumor.CEL (Prostate cancer datasets) , (upper picture charts tumor-normal row-pair 4)
index group entries for column 5
00068.00000 00002.00000
00078.00000 00010.00000!(1)
00079.00000 00001.00000
00090.00000 00011.00000!(2)
00091.00000 00001.00000
00094.00000 00003.00000!(3)
00095.00000 00001.00000
00100.00000 00005.00000!(4)
00101.00000 00001.00000
00110.00000 00009.00000!(4)
00111.00000 00001.00000
00122.00000 00011.00000!(4)
00123.00000 00001.00000
00126.00000 00003.00000!(5)
00127.00000 00001.00000
(1)!00068.00000 00014.12500 00000.25000
00014.12500 00000.25000!
Hs.320 gnl|UG|Hs#S429 Human mRNA for XP-C repair complementing protein (p125), complete cds 35647_at 14 P
Hs.225998 gnl|UG|Hs#S1570249 Homo sapiens mRNA cDNA DKFZp434C153 (from clone DKFZp434C153) 14 P
Hs.34012 gnl|UG|Hs#S305504 Human breast cancer susceptibility (BRCA2) mRNA, complete cds 1990_g_at 14 P
Hs.73957 gnl|UG|Hs#S3204 Homo sapiens GTP-binding protein (RAB5) mRNA, complete cds 36110_at 14 P
Hs.40368 gnl|UG|Hs#S525903 zl30d10.s1 Homo sapiens cDNA, 3' end 41548_at 14 P
Hs.172471 gnl|UG|Hs#S5854 Homo sapiens (clone hKvBeta3) K+ channel beta subunit mRNA, complete cds 32709_at 14 P
Hs.155160 gnl|UG|Hs#S1091020 Homo sapiens SRp46 splicing factor retropseudogene mRNA 40262_at 14 P
Hs.107014 gnl|UG|Hs#S953290 Human Chromosome 16 BAC clone CIT987SK-327O24 41417_at 14 P
Hs.158286 gnl|UG|Hs#S1244962 Homo sapiens mRNA for KIAA0446 protein, partial cds 32091_at 14 M
Hs.106369 gnl|UG|Hs#S382 Human microsomal stress 70 protein ATPase core (stch) mRNA, complete cds 38677_at 14 P
00014.25000 00000.12500
00014.37500 00000.12500
00015.00000 00000.62500!
Hs.194143 gnl|UG|Hs#S554446 Human BRCA1, Rho7 and vatI genes, complete cds, and ipf35 gene, partial cds 604_at 15 P
Hs.55279 gnl|UG|Hs#S520 Human maspin mRNA, complete cds 863_g_at 15 P
Hs.167031 gnl|UG|Hs#S1569908 Homo sapiens mRNA cDNA DKFZp566D133 (from clone DKFZp566D133) 15 P
Hs.750 gnl|UG|Hs#S377441 H.sapiens mRNA for fibrillin 32535_at 15 P
Hs.50123 gnl|UG|Hs#S1090507 Homo sapiens C2H2 zinc finger protein (ZNF189) mRNA, complete cds 36072_at 15 P
Hs.194704 gnl|UG|Hs#S1368361 Homo sapiens leucine-rich glioma-inactivated protein precursor (LGI1) mRNA, complete cds 38888_at 15 P
Hs.8262 gnl|UG|Hs#S342614 Human lysosome-associated membrane protein-2b (LAMP2) mRNA, alternatively spliced form h-lamp-2b, complete cds 38402_at 15 P
00015.25000 00000.25000!
00015.37500 00000.12500
00015.50000 00000.12500
00015.75000 00000.25000!
00016.12500 00000.37500!
Hs.44566 gnl|UG|Hs#S569473 Human protein immuno-reactive with anti-PTH polyclonal antibodies mRNA, partial cds 36020_at 16 P
Hs.109805 gnl|UG|Hs#S952942 Homo sapiens incomplete cDNA for a mutated allele of a myosin class I, myh-1c 41439_at 16 M
Hs.227209 gnl|UG|Hs#S1569792 Homo sapiens mRNA cDNA DKFZp586F1019 (from clone DKFZp586F1019) 16 P
Hs.75258 gnl|UG|Hs#S1090953 Homo sapiens histone macroH2A1.2 mRNA, complete cds 36576_at 16 P
Hs.181309 gnl|UG|Hs#S924838 ai43d10.s1 Homo sapiens cDNA, 3' end 41240_at 16 P
Hs.18573 gnl|UG|Hs#S591986 H.sapiens mRNA for acylphosphatase, erythrocyte (CT) isoenzyme 33334_at 16 P
Hs.278670 gnl|UG|Hs#S1263992 Homo sapiens okadaic acid-inducible phosphoprotein (OA48-18) mRNA, complete cds 34397_at 16 P
Hs.26450 gnl|UG|Hs#S1263784 Homo sapiens mRNA for KIAA0725 protein, partial cds 35177_at 16 P
00016.37500 00000.25000!
00016.50000 00000.12500
(1)!00078.00000 00016.50000 00000.12500
Entrez Gene References
(2)!00079.00000 00016.50000 00000.12500
00016.50000 00000.12500
00017.00000 00000.50000!
Hs.250655 gnl|UG|Hs#S3400 Human prothymosin alpha mRNA, complete cds 38589_i_at 17 P
Hs.44313 gnl|UG|Hs#S5357 H.sapiens rel proto-oncogene mRNA 1856_at 17 P
Hs.78335 gnl|UG|Hs#S377347 H.sapiens mRNA for novel T-cell activation protein 37406_at 17 M
Hs.3187 gnl|UG|Hs#S5880 Human cysteine-rich sequence-specific DNA-binding protein NFX1 mRNA, complete cds 34667_at 17 P
Hs.279681 gnl|UG|Hs#S1091101 Homo sapiens clone 23930 mRNA sequence 41283_at 17 P
Hs.110713 gnl|UG|Hs#S4298 H.sapiens dek mRNA 38992_at 17 P
Hs.153614 gnl|UG|Hs#S377387 Human retinitis pigmentosa GTPase regulator (RPGR) mRNA, complete cds 38164_at 17 P
Hs.82238 gnl|UG|Hs#S1368050 Homo sapiens mRNA for ribonuclease MRP protein subunit Pop4 38380_at 17 P
Hs.13565 gnl|UG|Hs#S1368357 Homo sapiens Sam68-like phosphotyrosine protein alpha (SALP) mRNA, complete cds 31786_at 17 P
Hs.14074 gnl|UG|Hs#S1090531 Homo sapiens clone 24627 mRNA sequence 31799_at 17 P
Hs.90077 gnl|UG|Hs#S305442 H.sapiens mRNA for TGIF protein 38805_at 17 P
Hs.118797 gnl|UG|Hs#S305420 Human E2 ubiquitin conjugating enzyme UbcH5C (UBCH5C) mRNA, complete cds 504_at 17 M
Hs.95655 gnl|UG|Hs#S705578 Homo sapiens K12 protein precursor mRNA, complete cds 41045_at 17 M
Hs.74375 gnl|UG|Hs#S553507 Human dishevelled homolog (DVL) mRNA, complete cds 164_at 17 P
Hs.8024 gnl|UG|Hs#S1367753 Homo sapiens mRNA for Prer protein 38046_at 17 P
00017.12500 00000.12500
00017.25000 00000.12500
00017.62500 00000.37500!
00017.75000 00000.12500
00017.87500 00000.12500
00018.25000 00000.37500!
Hs.235069 gnl|UG|Hs#S1403466 tu38g02.x1 Homo sapiens cDNA, 3' end 34685_at 18 M
Hs.267812 gnl|UG|Hs#S1264081 Homo sapiens sorting nexin 4 mRNA, complete cds 36216_at 18 P
Hs.89764 gnl|UG|Hs#S2160 Human Fragile X mental retardation 1 FMR-1 gene, 3' end, clones BC72 and BC22 37995_s_at 18 P
Hs.211575 gnl|UG|Hs#S269038 Human leukocyte interferon (leif) alpha-a gene 1770_at 18 P
Hs.77965 gnl|UG|Hs#S305321 Human Clk-associated RS cyclophilin CARS-Cyp mRNA, complete cds 37385_at 18 P
Hs.41154 gnl|UG|Hs#S342606 Homo sapiens mRNA for Zic protein, complete cds 36308_at 18 P
Hs.170160 gnl|UG|Hs#S1569840 Homo sapiens mRNA cDNA DKFZp564D0782 (from clone DKFZp564D0782) 18 P
00018.37500 00000.12500
00018.50000 00000.12500
00018.62500 00000.12500
00018.75000 00000.12500
00018.87500 00000.12500
(2)!00090.00000 00018.87500 00000.12500
(3)!00091.00000 00019.00000 00000.12500
00019.00000 00000.12500
00019.12500 00000.12500
00019.25000 00000.12500
00019.50000 00000.25000!
Hs.265561 gnl|UG|Hs#S1569793 Homo sapiens mRNA cDNA DKFZp586H0519 (from clone DKFZp586H0519) 19 P
Hs.108903 gnl|UG|Hs#S1264099 Homo sapiens HRIHFB2017 mRNA, partial cds 37170_at 19 P
Hs.111065 gnl|UG|Hs#S553287 H.sapiens mRNA for tre oncogene (clone 210) 1613_s_at 19 P
Hs.26764 gnl|UG|Hs#S998729 Homo sapiens mRNA for KIAA0546 protein, partial cds 35184_at 19 P
Hs.91146 gnl|UG|Hs#S1569807 Homo sapiens mRNA cDNA DKFZp586E0820 (from clone DKFZp586E0820) 19 P
Hs.128231 gnl|UG|Hs#S1090678 Homo sapiens prostate associated PAGE-1 mRNA, complete cds 32997_at 19 P
Hs.107526 gnl|UG|Hs#S1041186 ou35b04.x1 Homo sapiens cDNA, 3' end 39889_at 19 M
Hs.277721 gnl|UG|Hs#S5683 Human mRNA for KIAA0049 gene, complete cds 33444_at 19 P
Hs.158205 gnl|UG|Hs#S816388 Human basic-leucine zipper nuclear factor (JEM-1) mRNA, complete cds 32088_at 19 P
Hs.108660 gnl|UG|Hs#S1368576 Homo sapiens ABC transporter MOAT-C (MOAT-C) mRNA, complete cds 41428_at 19 M
Hs.169474 gnl|UG|Hs#S1569795 Homo sapiens mRNA cDNA DKFZp586J0119 (from clone DKFZp586J0119) 19 P
Hs.96094 gnl|UG|Hs#S417665 Human nicotinic acetylcholine receptor beta3 subunit precursor, mRNA, complete cds 35035_at 19 P
(3)!00094.00000 00019.50000 00000.25000
(4)!00095.00000 00019.62500 00000.12500
00019.62500 00000.12500
00019.87500 00000.25000!
00020.12500 00000.25000!
Hs.44268 gnl|UG|Hs#S309597 yw10h10.s1 Homo sapiens cDNA, 3' end 33538_at 20 M
Hs.220529 gnl|UG|Hs#S1972 Human carcinoembryonic antigen mRNA (CEA), complete cds 1582_at 20 P
Hs.150390 gnl|UG|Hs#S892241 Homo sapiens KIAA0425 mRNA, complete cds 39762_at 20 P
Hs.169750 gnl|UG|Hs#S5529 H.sapiens tpr mRNA 421_at 20 P
Hs.267811 gnl|UG|Hs#S1569559 Homo sapiens mRNA for KIAA1099 protein, complete cds 34676_at 20 M
Hs.182741 gnl|UG|Hs#S816465 Homo sapiens mRNA for T-cluster binding protein, complete cds 41763_g_at 20 P
Hs.203910 gnl|UG|Hs#S1569809 Homo sapiens mRNA cDNA DKFZp586N1020 (from clone DKFZp586N1020) 20 P
Hs.194637 gnl|UG|Hs#S605535 zs35h03.s1 Homo sapiens cDNA, 3' end 40952_at 20 P
Hs.5120 gnl|UG|Hs#S1319316 PEC1.2_15_H01.r Homo sapiens cDNA, 5' end 34891_at 20 P
Hs.73957 gnl|UG|Hs#S3204 Homo sapiens GTP-binding protein (RAB5) mRNA, complete cds 600_at 20 P
00020.37500 00000.25000!
00020.75000 00000.37500!
00020.87500 00000.12500
00021.00000 00000.12500
00021.37500 00000.37500!
Hs.20716 gnl|UG|Hs#S746684 zx46b09.r1 Homo sapiens cDNA, 5' end 32831_at 21 P
Hs.72157 gnl|UG|Hs#S1569833 Homo sapiens mRNA cDNA DKFZp564I1922 (from clone DKFZp564I1922) 21 P
Hs.3352 gnl|UG|Hs#S553781 Human transcriptional regulator homolog RPD3 mRNA, complete cds 34368_at 21 M
Hs.258812 gnl|UG|Hs#S1569367 Homo sapiens mRNA for KIAA0992 protein, partial cds 41191_at 21 P
Hs.118140 gnl|UG|Hs#S1263775 Homo sapiens mRNA for KIAA0716 protein, complete cds 41620_at 21 M
Hs.48297 gnl|UG|Hs#S1569806 Homo sapiens mRNA cDNA DKFZp586C1620 (from clone DKFZp586C1620) 21 P
Hs.75935 gnl|UG|Hs#S1746 Human mRNA for KIAA0077 gene, partial cds 36978_at 21 P
Hs.49007 gnl|UG|Hs#S553178 H.sapiens PAP mRNA 34855_at 21 P
Hs.118127 gnl|UG|Hs#S268902 Human alpha-cardiac actin gene, 5' flank and 39063_at 21 P
Hs.47438 gnl|UG|Hs#S1220808 qx88h10.x1 Homo sapiens cDNA, 3' end 36040_at 21 P
00021.50000 00000.12500
00021.62500 00000.12500
00022.00000 00000.37500!
Hs.180398 gnl|UG|Hs#S472821 Human LIM protein (LPP) mRNA, partial cds 41195_at 22 P
Hs.169840 gnl|UG|Hs#S3441 Human kinase (TTK) mRNA, complete cds 572_at 22 P
Hs.74405 gnl|UG|Hs#S4337 Human mRNA for 14.3.3 protein, a protein kinase regulator 32530_at 22 P
Hs.814 gnl|UG|Hs#S2942 Human MHC class II lymphocyte antigen (HLA-DP) beta chain mRNA, complete cds 38096_f_at 22 P
Hs.1510 gnl|UG|Hs#S269662 Messenger RNA for human leukocyte (alpha) interferon 427_f_at 22 M
Hs.108623 gnl|UG|Hs#S267 Human thrombospondin 2 (THBS2) mRNA, complete cds 659_g_at 22 P
Hs.24391 gnl|UG|Hs#S1244959 Homo sapien mRNA for putative secretory protein, hBET3 34705_at 22 P
Hs.22028 gnl|UG|Hs#S1527821 wn53b06.x1 Homo sapiens cDNA, 3' end 41518_at 22 M
Hs.2450 gnl|UG|Hs#S4267 Human mRNA for KIAA0028 gene, partial cds 34764_at 22 P
Hs.80343 gnl|UG|Hs#S417593 Human MT2-MMP gene for matrix metalloprotein, complete cds 1169_at 22 P
Hs.54089 gnl|UG|Hs#S554470 Human BRCA1-associated RING domain protein (BARD1) mRNA, complete cds 1801_at 22 P
Hs.25213 gnl|UG|Hs#S1570052 Homo sapiens mRNA cDNA DKFZp586F1318 (from clone DKFZp586F1318) 22 P
Hs.180789 gnl|UG|Hs#S5956 Homo sapiens (clone S164) mRNA, 3' end of cds 41208_at 22 P
Hs.263671 gnl|UG|Hs#S386797 zb29g04.s1 Homo sapiens cDNA, 3' end 34887_at 22 P
Hs.267819 gnl|UG|Hs#S705478 Human protein phosphatase inhibitor 2 (PPP1R2) gene 812_at 22 P
Hs.158675 gnl|UG|Hs#S473018 Homo sapiens mRNA for ribosomal protein L14, complete cds 31907_at 22 P
Hs.169200 gnl|UG|Hs#S1263600 Homo sapiens CD44 isoform RC (CD44) mRNA, complete cds 31472_s_at 22 P
00022.12500 00000.12500
00022.37500 00000.25000!
00022.62500 00000.25000!
00022.87500 00000.25000!
00023.00000 00000.12500
00023.12500 00000.12500
00023.37500 00000.25000!
Hs.848 gnl|UG|Hs#S1182 Human immunophilin (FKBP52) mRNA, complete cds 38729_at 23 P
Hs.234742 gnl|UG|Hs#S342617 Human salivary peroxidase mRNA, complete cds 34161_at 23 P
Hs.90765 gnl|UG|Hs#S551406 Human fibrinogen alpha chain gene, complete mRNAs 38825_at 23 M
Hs.109052 gnl|UG|Hs#S1090954 Homo sapiens mitochondrial proteolipid 68MP homolog mRNA, nuclear gene encoding mitochondrial protein, complete cds 38967_at 23 P
Hs.22599 gnl|UG|Hs#S1090825 Homo sapiens mRNA for KIAA0705 protein, complete cds 34257_at 23 P
Hs.78465 gnl|UG|Hs#S269129 Human c-jun proto oncogene (JUN), complete cds, clone hCJ-1 1895_at 23 P
Hs.112378 gnl|UG|Hs#S603 Human PINCH protein mRNA, complete cds 39232_at 23 P
Hs.211569 gnl|UG|Hs#S2628 Human G protein-coupled receptor kinase (GRK5) mRNA, complete cds 40994_at 23 P
Hs.3830 gnl|UG|Hs#S1367653 Homo sapiens mRNA for KIAA0893 protein, complete cds 35720_at 23 P
Hs.77239 gnl|UG|Hs#S891922 Homo sapiens mRNA for OCTN1, complete cds 40391_at 23 P
Hs.262476 gnl|UG|Hs#S1827 Human S-adenosylmethionine decarboxylase mRNA, complete cds 36684_at 23 P
Entrez Gene References
00023.62500 00000.25000!
00023.87500 00000.25000!
00024.37500 00000.50000!
Hs.206927 gnl|UG|Hs#S1570574 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 254679 38930_at 24 P
Hs.89546 gnl|UG|Hs#S2103 Human endothelial leukocyte adhesion molecule 1 (ELAM-1) mRNA, complete cds 265_s_at 24 P
Hs.96744 gnl|UG|Hs#S1570002 Homo sapiens mRNA cDNA DKFZp586D0823 (from clone DKFZp586D0823) 24 P
Hs.114599 gnl|UG|Hs#S4564 Human COL8A1 mRNA for alpha 1(VIII) collagen 37459_at 24 P
Hs.44563 gnl|UG|Hs#S1263707 Homo sapiens clone 640 unknown mRNA, complete sequence 39960_at 24 P
Hs.220689 gnl|UG|Hs#S270132 Human GAP SH3 binding protein mRNA, complete cds 41133_at 24 M
Hs.270956 gnl|UG|Hs#S892111 Homo sapiens embryonic lung protein (HUEL) mRNA, complete cds 36013_at 24 P
Hs.44 gnl|UG|Hs#S1111 Human nerve growth factor (HBNF-1) mRNA, complete cds 34820_at 24 P
Hs.82921 gnl|UG|Hs#S554438 Homo sapiens mRNA for CMP-sialic acid transporter, complete cds 37895_at 24 P
Hs.25497 gnl|UG|Hs#S592024 H.sapiens mRNA for ROX protein 35145_at 24 P
Hs.2314 gnl|UG|Hs#S3992 Human mRNA for mannose-binding protein C 32945_i_at 24 P
Hs.12701 gnl|UG|Hs#S100702 ya51h07.r2 Homo sapiens cDNA, 5' end 41689_at 24 M
Hs.154978 gnl|UG|Hs#S553747 Human mRNA for KIAA0261 gene, partial cds 40086_at 24 P
00024.62500 00000.25000!
Hs.202379 gnl|UG|Hs#S1090842 Homo sapiens endo 32869_at 25 P
Hs.75929 gnl|UG|Hs#S417460 Human mRNA for OB-cadherin-1, complete cds 2087_s_at 25 P
Hs.16218 gnl|UG|Hs#S1367663 Homo sapiens mRNA for KIAA0903 protein, partial cds 40423_at 25 P
Hs.227146 gnl|UG|Hs#S535001 zl43c04.s1 Homo sapiens cDNA, 3' end 33399_at 25 P
Hs.182183 gnl|UG|Hs#S863 Human caldesmon mRNA, complete cds 41738_at 25 P
Hs.167 gnl|UG|Hs#S207 Human microtubule-associated protein 2 (MAP2) mRNA, complete cds 183_at 25 P
Hs.91773 gnl|UG|Hs#S551674 Human protein phosphatase 2A catalytic subunit-alpha gene, complete cds 237_s_at 25 P
Hs.621 gnl|UG|Hs#S876122 Homo sapiens mRNA for galectin-3, complete cds 35367_at 25 P
00024.75000 00000.12500
00024.87500 00000.12500
00025.00000 00000.12500
00025.12500 00000.12500
00025.25000 00000.12500
00025.62500 00000.37500!
Hs.2962 gnl|UG|Hs#S530179 zo16d05.r1 Homo sapiens cDNA, 5' end 34319_at 26 P
Hs.5011 gnl|UG|Hs#S715008 zu48b06.r1 Homo sapiens cDNA, 5' end 40261_at 26 P
Hs.178452 gnl|UG|Hs#S518 Human alpha2(E)-catenin mRNA, complete cds 41156_g_at 26 P
Hs.69351 gnl|UG|Hs#S3557 Homo sapiens indian hedgehog protein (IHH) mRNA, 5' end 899_at 26 P
Hs.179946 gnl|UG|Hs#S1569560 Homo sapiens mRNA for KIAA1100 protein, complete cds 41179_at 26 M
Hs.24125 gnl|UG|Hs#S1569542 Homo sapiens mRNA for KIAA1082 protein, partial cds 33870_at 26 P
Hs.1722 gnl|UG|Hs#S2698 Homo sapiens interleukin 1 alpha (IL 1) mRNA, complete cds 1076_at 26 P
Hs.251928 gnl|UG|Hs#S875989 Human Chromosome 16 BAC clone CIT987SK-A-589H1 33836_at 26 P
Hs.859 gnl|UG|Hs#S1197 Human protein kinase (JNK1) mRNA, complete cds 2071_s_at 26 P
(4)!00122.00000 00025.62500 00000.37500
(5)!00123.00000 00025.75000 00000.12500
00025.75000 00000.12500
00025.87500 00000.12500
00026.12500 00000.25000!
Hs.49526 gnl|UG|Hs#S1367991 Human DNA sequence from clone 273N12 on chromosome 6q16.1-16.3. Contains the gene for the N-Oct5a (N-Oct3, N-Oct5b) POU domain proteins and an unknown gene. Contains a putative CpG island, ESTs, STS, and GSSs 39987_at 26 M
Hs.209061 gnl|UG|Hs#S908312 ai08h05.s1 Homo sapiens cDNA, 3' end 32835_at 26 P
Hs.79101 gnl|UG|Hs#S472624 H.sapiens mRNA for cyclin G1 1903_at 26 P
Hs.1957 gnl|UG|Hs#S268581 Homo sapiens gene for serum amyloid P component, complete cds 38890_at 26 P
Hs.184175 gnl|UG|Hs#S1703587 Human DNA-binding factor mRNA, complete cds 33315_at 26 P
Hs.96063 gnl|UG|Hs#S554036 insulin receptor substrate-1 [human, skeletal muscle, mRNA, 5828 nt] 851_s_at 26 P
Hs.159468 gnl|UG|Hs#S480 Human zinc finger protein ZNF132 mRNA, complete cds 33597_at 26 P
Hs.243901 gnl|UG|Hs#S1569527 Homo sapiens mRNA for KIAA1067 protein, partial cds 33877_s_at 26 P
Hs.117242 gnl|UG|Hs#S592319 Human meningioma-expressed antigen 11 (MEA11) mRNA, partial cds 1228_s_at 26 P
00026.25000 00000.12500
00026.50000 00000.25000!
Hs.185973 gnl|UG|Hs#S816327 Homo sapiens putative fatty acid desaturase MLD mRNA, complete cds 33337_at 27 P
Hs.3610 gnl|UG|Hs#S472683 Human mRNA for KIAA0205 gene, complete cds 34387_at 27 P
Hs.62349 gnl|UG|Hs#S1570533 Human DNA sequence from clone 1175I6 on chromosome 20. Contains the gene for Ras inhibitor JC265 (Ras association (RalGDS 36550_at 27 P
Hs.123654 gnl|UG|Hs#S1367574 Homo sapiens mRNA for KIAA0824 protein, partial cds 41665_at 27 P
Hs.83164 gnl|UG|Hs#S2549 Homo sapiens alpha-1 type XV collagen mRNA, complete cds 38427_at 27 P
Hs.13063 gnl|UG|Hs#S876361 Homo sapiens putative transcription factor CA150 mRNA, complete cds 39426_at 27 P
Hs.99954 gnl|UG|Hs#S3297 Human serine 34055_at 27 P
Hs.78944 gnl|UG|Hs#S634 Human helix-loop-helix basic phosphoprotein (G0S8) mRNA, complete cds 37701_at 27 P
Hs.153106 gnl|UG|Hs#S953093 Homo sapiens clone 23728 mRNA sequence 38154_at 27 P
Hs.129928 gnl|UG|Hs#S1244970 Homo sapiens mRNA for KIAA0454 protein, partial cds 39422_at 27 P
Hs.30541 gnl|UG|Hs#S705765 Homo sapiens mitochondrial DNA polymerase accessory subunit precursor (MtPolB) mRNA, nuclear gene encoding mitochondrial protein, complete cds 39643_at 27 P
(5)!00126.00000 00026.25000 00000.12500
These mRNA .CEL (V3) data files were published by the title Cancer Program Datasets at www.broad.mit.edu .
There were computed using this authors method that is motivied by exploration of genetic text complexity as cited by this article (published by www.ncbi.nih.gov) :
On the complexity measures of genetic sequences.
Institute of Mathematics, Siberian Branch of Russian Academy of Science, Novosibirsk, Russia. gusev@math.nsc.ru
MOTIVATION: It is well known that the regulatory regions of genomes are highly repetitive. They are rich in direct, symmetric and complemented repeats, and there is no doubt about the functional significance of these repeats. Among known measures of complexity, the Ziv-Lempel complexity measure reflects most adequately repeats occurring in the text. But this measure does not take into account isomorphic repeats. By isomorphic repeats we mean fragments that are identical (or symmetric) modulo some permutation of the alphabet letters. RESULTS: In this paper, two complexity measures of symbolic sequences are proposed that generalize the Ziv-Lempel complexity measure by taking into account any isomorphic repeats in the text (rather than just direct repeats as in Ziv-Lempel). The first of them, the complexity vector, is designed for small alphabets such as the alphabet of nucleotides. The second is based on a search for the longest isomorphic fragment in the history of sequence synthesis and can be used for alphabets of arbitrary cardinality. These measures have been used for recognition of structural regularities in DNA sequences. Some interesting structures related to the regulatory region of the human growth hormone are reported.
Routine sources are included in mm57.zip ( at 17.12.2009 v2.2.0 ) and results were computed in the in the following order :
(1) Number group (s) (bands) were determined by several runs of mmd_C.cpp , mm5751d.cpp or mm57531d.cpp using increasing number serie multiplication factor ( e.g. 0.8,1,2,4 ... where size of miltiplier would determine band range and CEL number scope) .
So each mult factor would produce band (s) range (s) scale that is most accurate within a limited range of CEL number (s) value (s).
The produced range files were merged (within or by choosen multiplier segment) into a single file e.g. xd.txt regarding number chaining (distances) that will be re-referenced after sequence (s) examination.
(2) mm30315d.cpp run would output CEL array numbers attributed (marked) by band (range) index.
(3) All produced CEL array indexes sectioned by quadrants were permuted in the following way:
e.g. the band index order 123456789 would produce 123, 234, 345, 456 ....
or the following 123456 sequence would permute into 123234345456 .
(4) x6 (number (s)) long permuted sequences represented by 4-bits x4 symbols (A-P for values 0-15) were grouped by binary factor group symbol order . Each group was attributed by the leftmst non-zero x4-bit binary factor segment (s) order number (0-3)
e.g. 1 2 2 2 3 for index sequence ABCC AABA AABD AABC AAAB
(5) ims.cpp would check redundance of each group member outputed by the previous step through the (permuted) CEL file indexes .
It would produce x6 (band) index number long grouped list of redundant index sequences .
(6) a2_t.cpp would compute index to index range (s) based on each produced redundant sequence , output grup file naming would be used for group permutations (s) matching .
Spredsheet document chart curve would display (redundancy) count vs index number (s) axis ( for a single index group file ).
(7) Multiple scan results name (s) cross section of previous file (sets) will determine complex sequence redundance (absence) .
Conjunction of these factor groups builds a unique sequence set expression (cs_1.cpp , while cat_1.cpp would output unique eg tumor sequences ) . Image bellow present probe set (scans pt1 - pt3 3 probe sets) (CEL files) (y axis) vs unique seqence frequency (x axis) from:
Gene Expression-Based Classification and Outcome Prediction of Central Nervous System Embryonal Tumors .
(*) Results were matched against xd.txt number values referenced by binary index grouping bands using mm5751d.cpp on selected columns from a choosen sequence group file .
(**) All computed data and corresponding sequences depend on ( binary ) multiplier values .
Their values determine the contents of the abstract of binary base groups inside each of the 4x4 bit ( symbol ) integers and the base indexes produced from the measured values on the base of their ranges , so different ( sequence ) abstraction levels may get computed . While low abstraction levels may be used for a single band subgrouping , high level abstraction may be used eg for a mass sequence comparisson . It is upon the examiner to decide which sequencing may be used .
(!) The term compression (in the cited article - Ziv-Lempel compression) and its relation to (number series) enthropy grouping is shown (and explained) in the following (principia example , but functional) compression rotine .
This routines' logic (in an abstracted sense) was used in the computed genetic number series and their results .
(!!) m_13_3.zip ( at 17.12.2009 v2.0.1 ).
(!!!) In this context the vector array aq(holding two indexes and number diff.) and its index count aqi corespond o the term complexity measure .
The less the aqi count is input file data serialization will have larger enthropy and opposite .
And the aq array index combination (s) would state the input file number series sequence (s) complexity .
To Borce Dzinleski
These routines were written by Dzinleski Jasenko jasenko@unet.com.mk who is the author of C/C++ based routines for encryption/decryption, large numbers operations, the 123SQL database engine and the simplified mariaBasic interpreter which are undergoing projects . This project is self-financing and any contributions are welcomed .
This site resulted in years long support from Borce & Dusica Dzinleski and Nada Popstefstefanova is devoted to them and especially to my daughter Maria Dzinleska .The author is currently seeking for a developers job and this is his cv.IMPLEMENTATION
- RIFF(WAV) COMPRESSION (principia example)
This is a binary compression implementation on PDA recording device output file (16 bit, 8000 Hz, 128 kbps Wav). This functional example performs looseless wav compression on PDA recording file up to 350 sec.
08.07.2008 VRM 1.0.0 Download File mar70.zip- BYTE ORDER COMPRESSION
mdiff and boc routines byte order compression utilization via (re) occuring 2-byte order pairs indexing . This routine processes each data byte and next data byte pair (s) through this C/C++ code ((((b8e&<data byte>)>>1)^((b8e&<next data byte>)>>1))<<1)|((b8o&<data byte>)^(b8o&<next data byte>)) where b8e is an 8-bit even bit mask and b8o is an 8-bit odd bit mask . Thus 2-byte (s) order (sequence) is truncated into a single byte field . Two byte resultant field (s) consisting of byte 1, byte 2 and byte 2, byte 3 for a single 16-bit dictionary entry . Thus compressed data results in ( (re) occuring entries) index number order . Index entries are bit truncated when written to the compressed data output file . Compression dictionary produced while compressing typical ASCII data file eg source code or HTML code is relatively small and average compression gains in such files are good .
12.09.2008 VRM 1.1.0 Download File e1173.zip>
13.09.2008 VRM 1.0.0 Download mdiff, boc and byte order compression in e117_all.zip- 6-bit BINARY COMPRESSION
This is a fast compression routine based on a 4-byte data word translation via 6-bit bit parity table . 6 bit table entries were computed by ommitting last two bits (having decimal values 1 and 2) in a single byte (0 to 255) giving 64 index entries combination (s) per data byte . Also all truncation entries from a 4-byte data word have only 256 combination (s) . The 4 6-bit (truncated) dictionary entries are (re) indexed and writen to a compressed data output file in a truncated index number order having (binary) length (s) from 7 to 18 bits compared to the original data 32 bit (word) length . Useful for compressing large document data files (binary and text data documents) . Yet compression gain in ASCII data files is obvious due to short binary length of index number entries .
23.02.2010 VRM 3.3.0 Download File mar6_330_1.zip
- BINARY COMPRESSION 79
This a binary compression based on 2-byte data word right (low) bit truncation dependent on max of dictionary (re) occurences for each data buffer . Thus such (truncated) dictionary entries represent most of input data buffer . Dictionary entries are written to the compressed data file in a left truncating manner with the leftmost significant bit ommited , having 7 to 16 bits in length . This method performs fast and efficient data storage . This routine performs principia used in the bellow listed methods .
01.08.2008 VRM 1.4.0 Download File mar79.zip
- BINARY TEXT COMPRESSION
This is a fast and efficient compression example that executes fast input data indexing and dictionary occurrence search based on binary 4x4-bit long data samples . Indexed sequences are checked vs variable data length buffer .
Thus this compression method gains speed concerning strict 4x4(16) - bit long dictionary patterns . This routine is subject of further development .
04.09.2007 VRM 1.3.3 Download File mar9.zip
- BINARY COMPRESSION ROUTINE
Binary compression methods are widely used in communications, data storage and numeric analysis. Exploring genetic complexity numeric sequences employ such methods. Some of them are presented on this site together with a command-line Win32 implementation (s) that demonstrates the capability of compression of large ASCII data files and binary files and also slightly modified in numeric data sequence analysis. This binary compression method is based on numeric sequence generated by the following binary formula as presented by the C/C++ syntax: #define op_7(x,y)(((x+y)^y)|(((x&y)!=0)?(x&y)/y:0)) . This numeric sequence represents all numbers from 0-255(8-bit) for 0-127(7-bit) arguments in an x-y matrix manner . When always x=y and x:0-127 it results in all 8-bit odd numbers . When applied on a 2-byte data sequence it results in 14 or less bits long index . Combined together with one 1-bit substract indicator it will allow compression . Using these arguments as dictionary entries coded by hi/lo/length indicators whose reocurring indexes are stored instead of the input data allows gain of an average 30% compression in large ASCII text files . This numeric sequence formula was generated by another routine written for the purpose of exploring numeric sequences generation .This is an compression Win32 command-line tool based on binary compression . This example states the speed and efficiency of this static large ASCII files compression method .
04.09.2007 VRM 1.3.3 Download File mar.zip
- BINARY COMPRESSION 77
This is a binary compression based on 2-byte long data binary shifting concatenation (bit density increase) into dictionary entries that are left truncated (common in ASCII data text files) . Compression gain depends on data redundancy in an inverse meaning . The larger the enthropy compression will increase .
04.06.2008 VRM 1.1.0 Download File mar77.zip
- BINARY FACTOR GROUPING COMPRESSION ROUTINE
This compression example uses binary pattern indexing by 2-byte sequence bit truncation from 16-12 bits in order to gain max of dictionary occurrence . This compression method is a compression gain vs unoptimized compression speed compromise .
This example states the correctness of the genetic text complexity display routine since its dictionary covers most of the numeric sequences occurrence . Yet this compression example is subject of further development .21.09.2007 VRM 1.4.0 Download File mar73.zip
- ASCII TEXT FILE FAST SORT/INDEXING Routine
This is a fast sorting/indexing example that builds a file position sorting tree as a result of n-depth text file line byte sorting . The sorted sequence tree may expand to further depth levels , this routine uses default depth 6. It exibits fast sorting of a text file up to the size 100K lines/rows .
E.g.: C:\msort3 -f "War and Peace NT.txt"
30.10.2007 VRM 1.3.1 Download File msort3.zip
- MCALC Simple Calc routine
This is a simple CALC screen routine .
The -d2 or -d4 or -d6 command line switch stands for number of decimal places . Keyboard input exit char is q and reset char is c .
09.10.2009 VRM 1.0.1 Download File mcalc.zip
- MDUMP ASCII Text File Sequence Redundance Dump
This is a ASCII text file dump method that finds text data sequences inside a ASCII text file . Usefull for creating text file data sentence definition (s) .
18.09.2009 VRM 2.0.1 Download File mdump3.zip
- MDADD STRING DATE ADD
This is a string date add routine that computes add of start date with increment in days, months and (or) years . Comand line switches requires the start date string, increment string input together with a date formating string eg mdadd 20081008 00010000 YYYYMMDD (for adding 1 year) .
16.11.2008 VRM 1.1.1 Download File mdadd.zip
- MDDIFF STRING DATE DIFFERENCE
This is a string date difference routine that computes difference between two date strings in days, months and years . Comand line switches require two date (s) string input together with a date formating string eg mddiff 19591117 20081008 YYYYMMDD .
08.10.2008 VRM 1.1.0 Download File mddiff.zip
- MDIFF FILE COMPARE
This is a file compare routine based on a bit parity comparisson of 2-byte sequences . Hashing was built on sequenced use of this C/C++ code ((((b8e&<data byte>)>>1)^((b8e&<next data byte>)>>1))<<1)|((b8o&<data byte>)^(b8o&<next data byte>)) where b8e is an 8-bit even bit mask and b8o is an 8-bit odd bit mask , examined via byte sequence group (s) count (file 1 vs file 2) compare . Command line requires file 1 name and file 2 name resulting in fast comparrison result message . The -d (detail) switch displays all difference (lines) . Useful for file compare and change tracking in document and source code files .
19.03.2009 VRM 1.3.3 Download File mdiff3.zip
24.06.2009 VRM 2.0.1 Download File mdiff5.zip
- BIT PARITY BYTE ORDER FILE CHECKSUM
This is a file fingerprint routine that outputs cheksum number (s) file . Hashing was built on sequenced use of this C/C++ code ((((b8e&<data byte>)>>1)^((b8e&<next data byte>)>>1))<<1)|((b8o&<data byte>)^(b8o&<next data byte>)) where b8e is an 8-bit even bit mask and b8o is an 8-bit odd bit mask . Sequenced number treshold count was computed with comarisson of original byte (bit parity) result vs generated result . Number point (s) were computed inside a 1024 byte file buffer and stored (XOR op) inside a 512 number sequence consequently . The output fingerprint file numbers state data order and integrity eg when compared vs same file (copy from restore or data transfer) cheksum (s). Command line requires input filename and cheksum output filename . Usefull for building cheksum list (s) of important data archive (s) .
25.03.2009 VRM 1.3.0 Download File bp_boc3.zip
Download Bit Parity Tools bp_tools.zip
THE RANDOM KEYS DISTRIBUTION ENCRYPTION ROUTINE
This is a strong encryption method based on a 4 number keys random number distribution . The 4 (5 - digit) number keys provide strong encryption protection due to message hashing that is provided on random number (s) generation where the inputed keys are used as random seeds . Each user choosen key is randomized and message hash is produced with a different randomizing method . Execution requires usage of the following command line switches:
eg r71 -a 11111 -b 22222 -c 33333 -d 44444 -e < filename to encrypt>
and to decrypt eg r71 -a 11111 -b 22222 -c 33333 -d 44444 -f < filename to decrypt>
where the numbers following the -a -b -c and -d switches are user chosen encryption 5 digit number keys.
1.1(min)...
minmv=999;
for(l=0;l<rsi;++l)
{if(n=0||l==0){n=rs[l][1];continue;}
if(n==rs[l][1]||n+1==rs[l][1]||n-1==rs[l][1]){n=rs[l][1];}else{
if(minmv>rs[l][2]){minmv=rs[l][2];minl=l;}
n=0;}
}
if(df){printf(" %d",rs[minl][0]%outm);}
htable[hti_dmin][0]=rs[minl][0]%outm;++hti_dmin;
...1.2(max)...
maxmv=0;
for(l=0;l<rsi;++l)
{if(n=0||l==0){n=rs[l][1];continue;}
if(n==rs[l][1]||n+1==rs[l][1]||n-1==rs[l][1]){n=rs[l][1];}else{
if(maxmv<rs[l][2]){maxmv=rs[l][2];maxl=l;}
n=0;}
}
if(df){printf(" %d",rs[maxl][0]%outm);}
htable[hti_dmax][1]=rs[maxl][0]%outm;++hti_dmax;
...2.1(min)...
minmv=999;
for(l=0;l<rsi;++l)
{if(n=0||l==0){n=rs[l][1];continue;}
if(n==rs[l][1]||n+1==rs[l][1]||n-1==rs[l][1])
{
n=rs[l][1];
if(minmv>rs[l][2]){minmv=rs[l][2];minl=l;}}else{n=0;}
}
if(df){printf(" %d",rs[minl][0]%outm);}
htable[hti_rmin][3]=rs[minl][0]%outm;++hti_rmin;
...2.2(max)...
maxmv=0;
for(l=0;l<rsi;++l)
{if(n=0||l==0){n=rs[l][1];continue;}
if(n==rs[l][1]||n+1==rs[l][1]||n-1==rs[l][1])
{
n=rs[l][1];
if(maxmv<rs[l][2]){maxmv=rs[l][2];maxl=l;}}else{n=0;}
}
if(df){printf(" %d",rs[maxl][0]%outm);}
htable[hti_rmax][3]=rs[maxl][0]%outm;++hti_rmax;
...(1) Each of the entered key numbers resultant distribution series (3-133)*(3-7) according to these criteria are written in a 4 column table
(2) Each table is hashed according the bellow listed binary criteria
(3) The 4 resulting tables are then re-hashed using the same binary criteria.#define op_A(w,x,y,z)(((((w&0x0000ffff)<<16)|x)&0xffff0000)|((((y&0x0000ffff)<<16)|z)&0x0000ffff))
#define op_B(w,x,y,z)(((((x&0x0000ffff)<<16)|w)&0xffff0000)|((((z&0x0000ffff)<<16)|y)&0x0000ffff))
#define op_E(w,x,y,z)(op_A(w,x,y,z)>op_B(w,x,y,z)?op_A(w,x,y,z):op_B(w,x,y,z))
One out of the 4 functions running inside this encryption was used in the Game of life which is listed for download, and it states the diversity of random number distributions produced .
Try looping this encryption in the following way:
Step 1.C:\r7 -a <key1 number> -b <key2 number> -c <key3 number> -d <key4 number> -e "filename.txt"
Step 2.C:\r7 -a <key5 number> -b <key6 number> -c <key7 number> -d <key8 number> -e "previous_output.mar"
...
...
Step n.
and repeat it in the same manner n times until the desired security level is gained .
18.12.2007 VRM 1.3.3 Download File r7.zip
MARIAHASH THE ENCRYPTION ROUTINE
This is a fast encryption routine using proprietary hashing method. Cypher strength depends on a large hashing number and password length . password text must be entered in a password.txt file and should have between 50 and 100 char(s) .This routine was written by the authors wish to try to improve message privacy while sent across the networks .
09.06.2007 VRM 1.3.0 Download File 79923.zip
THE 123SQL DATABASE ENGINE
This is an undergoing project aimed to construct a small portable SQL database engine for PDA's, and this is a functional browsing engine that contains data and sample browsing statements . Data may be imported together with table/column creation . Typically the source data may be spreadsheet column TAB delimited export data . Database/table/column creation may be viewed in the included code following the -c switch . Table names and column names and field byte sizes should be specified, but column/field lengths my also vary in size row by row . The engine performs SQL keyword/syntax checking using the syntax/keywords list files included . Object names check and object attributes read is performed in the system database files named 123SQL_db_1.mar and 123SQL_db_2.mar . Database structure allows multiple object browsing . The sorting/searching routines require low machine resources thus meeting most modern PDA specifications and their sources were also published under different names .
This project was founded on the authors' unique relational database engine structure design . The 123SQL engine requires the following command line syntax:
E.g.: C:\910791 -d "Sample"
for attaching and browsing the included database, where Sample is the database name included . When
E.g.: C:\910791 -c "import_data_file.txt"
the engine will create a database table and table columns as specified in the included create.txt syntax and import the data from the file name specified after the -c switch . Number of column definitions and TAB delimited fields must match, if specified column length is greater than data length space justification will occur . Supported SQL like data browsing syntax is :
{select}
{*|column_name|column_name_1,...column_name_n}
{from}
{table_name|table_name_1,...table_name_n}
[where
|[column_name=string_litteral|column_name>string_litteral|column_name<string_litteral]
|[column_name>string_litteral and column_name<string_litteral]
|[column_name[>|<]string_litteral and column_name=string_litteral]
|[column_name=string_litteral or column_name=string_litteral or column_name=string_litteral]
|[column_name>string_litteral and column_name<string_litteral and column_name=string_litteral]
]
123SQL 15.04.2008 VRM 1.5.0 Download file 123SQL.zip
The MariaBasic Interpreter
The Maria Basic Interpreter is a command-line programming tool - interpreter aimed to help PDA users code formula/calculations, string and file procedures that execute on their handhelds. The included source code may easily (re) compile for various OS/CPU architectures , since it was written in ISO/ANSI C and requres moderate machine resources . Interpreter design allows fast execution of basic syntax like procedures with calculations and file/string operations. Its simplified syntax allows basic programming skills and may be used for learning , but may expand to execution of rather complex routines . This interpreter allows basic like (simplified) syntax commands like nesting, statement loops, and conditional execution. The ZIP archive ready for download includes a few txt files which are sample basic syntax supported nesting and file/string function example (s) . Source procedures may execute with a command line stating:
E.g.: C:\9901 -e "sample.txt".
The (sample1...7.txt) example sources show the code structure necessary to supply for program execution .Supported routine code syntax is :MariaBasic 1.9.9.5 Program Structure:
1. Coding convention (s)
(<string constant> is a single quoted literal)
(<num constant> is a number literal having [0-9,.] )
(<varname> is a string literal having [_,a-z,A-Z,0-9] + type declaration [%|&|#|$])
(type declaration [%|&|#|$] where % EQ integer data type , where & EQ 2x integer data type , where # EQ double data type , and $ EQ <=256 char data type)
(logical operator (s) are and , or , xor)
(relation operator (s) are > , < , = , >= , <= , <> )
2. Program body
1.Declarations:
2. Statements | Simple Block Statements | Nested Block Statements | Declarations | Comments
3. end Statement
- Comments:
rem <string constant>
- Declarations:
variable declaration (s):
{
[varname$=’<string constant>|’]|[varname%=<num constant>|0]|[varname&=<num constant>|0]| [varname#=<num constant>|0]
}
- Statements:
relation expression logical evaluation statement:
{
varname[%|&]=(varname[%|&|#|$][=,<>,>,<,>=,<=]varname[%|&|#|$]
[ or , and , xor ]
[ varname[%|&|#|$][=,<>,>,<,>=,<=]varname[%|&|#|$])
}
calculation statement:
{
varname[%|&|#]=[[varname[%|&|#]|[<num constant>]][^,*,/,+,-][[varname[%|&|#]|[<num constant>]]
}
string concatenation statement:
{
varname$=varname$+ varname$
}
string function statement (s):
{
varname[%|&]=len$( varname$)
varname[%|&|#]=val$( varname$)
varname$=trim$( varname$)
varname$=left$( varname$, <num constant>)
varname$=right$( varname$, <num constant>)
varname$=mid$( varname$, <num constant>, <num constant>)
varname$=format$( varname[%|&|#],<string constant>)
varname[%|&|#]=round$(varname#)
}
file operation statement (s):
{
open varname$ for [input]|[output] as #<num constant>
input #<num constant>, varname$
print #<num constant>, [<string constant>| varname[%|&|#|$][,]][;]
close #<num constant>
}
console output statement:
{
print [<string constant>| varname[%|&|#|$][,]][;]
}
- Simple Blocks:
simple if end if block:
{
if (<single relation expression>) then
<statements>
end if
}
Simple while wend Block:
{
while (<single relation expression>)
<statements>
wend
}
Simple for next Block:
{
for varname[%|&]=[[<num constant>]| varname[%|&]] to [<num constant>| varname[%|&]]
<statements>
next varname[%|&]
}
Nested Block Statement (s) (up to Level 3.)
Nested type 1. Block:
{
if () then
<statements>
end if
for to
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
next
<statements>
if () then
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
end if
<statements>
while ()
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
wend
<statements>
end if
}
Nested type 2. Block:
{
for to
<statements>
for to
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
next
<statements>
if () then
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
end if
<statements>
while ()
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
wend
<statements>
next
}
Nested type 3. Block:
{
while ()
<statements>
for to
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
next
<statements>
if () then
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
end if
<statements>
while ()
<statements>
if () then
<statements>
end if
<statements>
if () then
<statements>
end if
<statements>
wend
<statements>
wend
}
3. End of Program
{end}
This interpreter although functional is subject of further development and changes will occur. This package does not include all BASIC build (in) functions except the standard ones and more are going to get implemented. MariaBasic, when compiled for some PDA's compilers enables a simple but efficient programming PDA tool.
MariaBASIC 09.03.2010 VRM 2.0.1.0 Download file mariaBasic2010.zip
Jasenko Dzinleski at Download.com
Jasenko Dzinleski at Brothersoft.com
Jasenko Dzinleski at SourceForge.net
mariaBASIC at Brothersoft.com
123SQL at Softpedia.com
123SQL at TigerDirect.com
Here is a pair of routines written in mariaBasic:
rem
rem
rem
rem mariaBasic Sample code
rem
rem example: simple prime check
rem
rem
var1%=0
var2%=0
var3%=0
var5%=0
var6%=0
var7#=0
var8&=0
var9%=0
var10%=0
var11%=0
var13%=299
print "start"
print " "
for var1%=100 to 299
print " ",var1%;
var6%=var1%/2
var7#=var1%/2
var7#=var7#-var6%
var6%=100*var7#
var10%=0+0
for var2%=2 to 298
if var6%=50 then
var7#=var1%/var2%
var8&=var1%/var2%
var7#=var7#-var8&
var8&=1000000*var7#
end if
if var2%>=var1% then
var2%=var13%+1
end if
if var8&>0 then
var10%=var10%+1
end if
if var8&<0 then
var10%=var10%+1
end if
next var2%
var11%=var1%-2
if var10%=var11% then
print "."
end if
next var1%
print " "
print "end"
end
And here is a sample random generator code written in mariaBasic:
rem
rem
rem
rem mariaBasic interreter sample code
rem
rem example: simple random number generator
rem
rem
var1%=1
var2%=1
var3%=11111
var4%=0
var51&=0
var52&=0
var11#=0
var12#=0
var4%=var3%/100
for var1%=3 to 133
for var2%=3 to 7
var11#=1000*var2%/var1%
var12#=var3%/var11#
var51&=var12#*var4%
var52&=var12#*var4%/1000
var52&=var52&*1000
var52&=var52&-var51&
var4%=var4%+1
if var52&>0 thenprint " ",var52&;
end if
if var52&<0 thenvar52&=-1*var52&
print " ",var52&;end if
next var2%
var4%=var3%/100next var1%
end
That is equivalent to the following C/C++ code:
//-----------------------------------------------------
//
// mariaRandom Generator
//
//
// copyright Dzinleski Jasenko 2007 - 2009
//-----------------------------------------------------
#include <stdio.h>
#define seed 11111
#define outr 133
#define inr 7
#define rang 1000
int main()
{int i,j,k,n;
double v11,v12;
long v51,v52;
printf("\n\n\nThe mariaRandom Generator\n");
printf("\nWritten by Dzinleski Jasenko July,2007\n");
printf("OS Win32 VRM 1.0.1\n\n");
k=seed/100;
for(i=3;i<outr;++i)
{for(j=3;j<inr;++j)
{v11=1000*j/i;
v12=seed/v11;
v51=v12*k;
v52=v12*k/rang;
v52=v52*rang;
v52=v52-v51;
++k;
if(v52>0)
{printf(" %d",v52);
}
if(v52<0)
{v52*=-1;
printf(" %d",v52);}
}
k=seed/100;}
return(0);
}
And here is a game of life using this but yet improoved random number generator
Download a game of life VRM 1.2.1 at 17.07.2007 .
The game of life executes via the following command line switches e.g.:
r31 -s 31193 -g 50
where the number following -s is the random seed number (mostly over 10000) and the number following the -g switch is the number of generations produced (mostly over 5) .
Similar but more sofisticated random key seed number distribution is used in
THE RANDOM KEYS DISTRIBUTION ENCRYPTION ROUTINE providing strong message file encryption.
And here is the same game of life using 100x100 cells that outputs the generations data in a graphics BMP file format .
Download a game of life VRM 1.3.1 at 17.07.2007
THE FAST (ASCII and Unicode) TEXT FILES SEARCH ROUTINE
This is a fast text search routine that allows single (or quoted composite) string search throughout an ASCII or Unicode text (text containing) file(s) . Unicode search will also allow strings containing mixtures of different Unicode table(s).
E.g.:
1. (ASCII search) msearch3 <ASCII_input_filname.txt> <search_string>
2. (Unicode search) msearch3 <Unicode_input_filname.txt>
(search string in Unicode file uarg.txt and search results in Unicode file ures.txt)
03.07.2008 VRM 1.1.1 Download File msearch3.zip
THE FAST ASCII TEXT FILES SEARCH ROUTINE
This is a fast text search routine that allows multi string (up to 10 search strings containing one or more words within) search throughout an ASCII text file . So, each search string (quoted) may have one or more words. The -s switch allows any match, while the -e switch allows only exact match.
E.g.: C:\msearch -s(-e) "package install"+"media"+"component" -f "FreeBSD Handbook.htm"
E.g.: C:\msearch -s(-e) "network devices installation" -f "FreeBSD Handbook.htm"
E.g.:C:\msearch -s(-e) "trodes in his hands" -f "book_sd.txt"
E.g.:C:\msearch -s(-e) "Bezukhov and Natasha"+"Buonaparte Napoleon"+"Pierre" -f "War_and_Peace_NT.txt"
The program output will display all results along with their line number file positions, the unique and composite sentence search phrase matches together with their total occurrence count.15.04.2008 VRM 1.3.3 Download File msearch.zip
THE ASCII TEXT FILES SENTENCE CONTEXT SEARCH ROUTINE
This is a text file complex search routine that allows text search build on the context - sentence words concerning a given subject . This search allows automated search criteria build depending on sentence words contents and user choice . Sentence words files and their sentence links are built during the indexing phase for a given text file . After indexing, the routine will display all sentences for a chosen sentence subject (as enlisted in the words file) and allow detailed context search and all sentences display concerning the chosen context .
For the indexing type:E.g.: C:\r113 -i "War_and_Peace_NT.txt"
For the context search type:E.g.: C:\r113 -s(e) "Bagration" -f "War_and_Peace_NT.txt"
The -s switch enables any match search when d was chosen, and -e switch enables only exact word match. The included files contain the examples book already indexed. Typically the search word is a name, or a subject that is being often described and attributed in the book text . So after viewing/choosing the desired sentence/search combination all text lines containing the chosen words will be displayed . Thus viewing book contents by desired subject details requires smaller amount of time .15.04.2008 VRM 1.3.0 Download File r113.zip
THE FONT IMAGE RECOGNITION ROUTINE
This routine creates a vector shape sequence file (using -i switch) out of an 100x100 pixels 24 bit colour depth black and white image representing a character true type image (font) or character freehand drawing . Then using the -c switch the two index files derived from two different images are compared and graphics match result is displayed .
For the indexing type:
E.g.: C:\cr13 -i "Drawing1.bmp" "Drawing1_Index.txt"
For the comparison of two different index files type:
E.g.: C:\cr13 -c "Drawing1_Index.txt" "Drawing2_Index.txt"
At present the routine builds shape vectors on black/white bitmaps, it does not support different resolution nor colors/color depth.
But how does it work?
(1) indexing, creates vector txt file (that might be the meta character file) out of the bmp image file in the following manner:
- inverts the b/w file matrix (the way human eye sees it),
- searches for quadrants (10x10 pixels sized) with 40/60% b/w ratio, thus finding character image edges (up to 8 pairs in the same row),
- creates vectors out of each quadrant,
- shifts quadrants by (only) few pixels UP since bmp edges do not always REALLY represent character ID curves, repeating vector creation ...
and
(2) comparison of two vector files:
- shifts back all X-axis values subtracting them by absolute minX value,
- computes curve angles out of each quadrant values,
- computes resultant angles out of quadrant pairs building most real character curves,
- compares the two vector files angle pairs,
- computes match statistics .
This development is aimed for PDA users using easier ways for text input.
To Maria Dzinleska
27.04.2007 VRM 1.0.1 Download File cr13.zip
THE ROUTINE THAT GENERATES THE PRIME NUMBERS KEY PAIR OUT OF THEIR PRODUCT
These routines were written during and for the www.rsa.com prime key numbers context that requires finding the exact prime numbers key pair out of a very large (256,512...1024... bits long) product number. The routines were written in java and use the BIGINTEGER java class in order to compute the prime key pair .The starting point routine finds a prime numbers key pair with product_number_bit_length/2 bit length that give sufficient accuracy (near as far as possible) to the product number, the more the preciseness the more the computing time to spend . So the loop that computes the suggested starting prime number pair is limited with the corresponding number of equal product-target significant digits . The remaining procedures consequently perform a very long (all 1's and trailing ZEROS) 111 ... *10^N substraction (s) from the suggested key pair measuring the distance (difference) from the target product number by subsequent multiplication checks . At the point of diverging found and at a certain preciseness (number of equal significant digits) a new key pair may be generated through the first routine . Than the process has to be repeated while gaining more and more equal product-target significant digits .
23.07.2006 Download File Welcome.zip
How do these computations compute a very similar or near prime key pair out of a large product key?
Exmining the bellow listed mariBasic code and its (partial) output shows a few number products appearing at large division loop distances and having a 0000 period between decimal remainder values . Testing those (listed) numbers might prove that most of them are prime numbers . Testing large (200 decimal or more) product keys in this way would take indefinite time . So, the WelcomeQ routine uses a substraction operation on a proposed prime key pair . The routine that generates prime key pairs that have a given decimal target product number match is based on a binary field seed number modification basing only on target match numbers as match search loop starting point . The substractor (having the (decimal) value of e.g. 1111111111000000000000000) shifts the 1111111111 period to the right by approoving that this way truncated prime key pair product matches more and more decimals to the target product number . Actually there are sets of prime kepairs obtaining a certain decimal match .Usually it is necessay to switch between different pairs in order to increase the decimal match of the product . And that is the main iteration of this method sometimes requiring examining and rejecting large number of prime key pairs in order to gain one or more decimal match more . Gaining a 100 decimals precisenes on a common PC computer thus would not be hard to achieve . These computations generate prime keys having computable decimal match gain or complete product number match compared to a given huge product number .
Brief order and explanation of execution steps:
(1) generate 5 or more (depending on computing resources) decimal match places vs known target number prime key pairs (number of generated pairs also depends on computing resources)
(2) start subtracting by a given number of decimal 1 .... 1x10^X and multiplying each of primes in a key pair observing gain or loss in decimal match at product number vs target number . Observe match gain vs number of 1 ... 1 and X in 10^X in the subtraction factor . Thus prime distribution at that number point becomes visible .
(3) choose a prime probe as a base for generating new sets (depending on computing resources) of prime key pairs gaining usually somewhat less decimal match places at product number vs target number .
(4) iterate through the previos steps seeking a point at the prime distribution which indicates the existence of the absolute match key pair .
var1%=0
var2%=1234567
var3%=0
var5%=2
var6%=0
var7#=0
var8&=0
var9%=0
var10%=10000
var191%=0
var111#=0
var19%=10000
var11%=17317
var123%=91127
var13%=13009
var145%=98017
var15%=12251
var162%=98327
var17%=33757
var3%=var2%/2
while(var5%<var3%)
var7#=var10%*var2%/var5%
var8&=var2%/var5%
var8&=var7#-var8&*var10%
if var8&=0 then
print "=";
print var5%;
print "@";
print var7#;
print " ",var191%
var191%=0+0
end if
var191%=var191%+1
var5%=var5%+1
wend
end
=205759@6.000063e+04 1
=205760@6.000034e+04 1
=205761@6.000005e+04 1
=246909@5.000089e+04 41148
=246910@5.000069e+04 1
=246911@5.000049e+04 1
=246912@5.000028e+04 1
=246913@5.000008e+04 1
=308635@4.000087e+04 61722
=308636@4.000075e+04 1
=308637@4.000062e+04 1
=308638@4.000049e+04 1
=308639@4.000036e+04 1
=308640@4.000023e+04 1
=308641@4.000010e+04 1
=411509@3.000097e+04 102868
=411510@3.000090e+04 1
=411511@3.000083e+04 1
=411512@3.000075e+04 1
=411513@3.000068e+04 1
=411514@3.000061e+04 1
=411515@3.000053e+04 1
=411516@3.000046e+04 1
=411517@3.000039e+04 1
=411518@3.000032e+04 1
=411519@3.000024e+04 1
=411520@3.000017e+04 1
=411521@3.000010e+04 1
=411522@3.000002e+04 1
Dzinleski Jasenko - jasenko@unet.com.mk
Mailing Address:
+38922770296
Dositej Obradovik 15/8
1000 Skopje Republic of Macedonia
All published data, executables and sources from this site described above apply to GNU General Public License and can be used, copied, sold, redistributed or used in any other way only by written permission of Jasenko Dzinleski . Copyright (C) from 2001 - 2010 and later by Jasenko Dzinleski
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version .
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE . See the GNU General Public License for more details .
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc ., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA .